RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
TRIO-201ENST00000344135 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
TRIO-201ENST00000344135 FAM47AQ5JRC9 791 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 PFKFB2O60825 505 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 AOC3Q16853 763 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 LMBRD1Q9NUN5 540 aa10.06□□□□□ -0.8
TRIO-201ENST00000344135 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 IFIT3O14879 490 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 GADD45BO75293 160 aaPredicted RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 CDC27P30260 824 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 TMEM67Q5HYA8 995 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 PHKBQ93100 1093 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 ANGEL1Q9UNK9 670 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 GNAT2P19087 354 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 PLCD1P51178 756 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 R3HDM1Q15032 1099 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 WDR33Q9C0J8 1336 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 SH2B2O14492 632 aaPredicted RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 FIBPO43427 364 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 FDPSP14324 419 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 BTDP43251 543 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 NFXL1Q6ZNB6 911 aa10.05□□□□□ -0.8
TRIO-201ENST00000344135 RTFDC1Q9BY42 306 aaPredicted RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
TRIO-201ENST00000344135 LTBP1Q14766 1721 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 G3V3G9 751 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 F13A1P00488 732 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 GSE1Q14687 1217 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 APOA5Q6Q788 366 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 C15orf52Q6ZUT6 534 aaKnown RBP10.04□□□□□ -0.8
TRIO-201ENST00000344135 KIAA0825Q8IV33 1275 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
TRIO-201ENST00000344135 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 DPEP1P16444 411 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 USP5P45974 858 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 CACNB3P54284 484 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 GPT2Q8TD30 523 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 STAG1Q8WVM7 1258 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
TRIO-201ENST00000344135 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 CRNKL1Q9BZJ0 848 aaKnown RBP10.04□□□□□ -0.8
TRIO-201ENST00000344135 FTOQ9C0B1 505 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRIO-201ENST00000344135 SCN9AQ15858 1988 aa10.04□□□□□ -0.8
TRIO-201ENST00000344135 PDS5AQ29RF7 1337 aaKnown RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 KCNA3P22001 575 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 PICALMQ13492 652 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 IL27Q8NEV9 243 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 C7orf43Q8WVR3 580 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 TTF2Q9UNY4 1162 aaKnown RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 CCDC88AQ3V6T2 1871 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 SPTY2D1Q68D10 685 aaPredicted RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 ZNF274Q96GC6 653 aaPredicted RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 MROH7-TTC4A0A0A0MT08 1334 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 SALL1Q9NSC2 1324 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 CEBPZQ03701 1054 aaKnown RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 FAM184AQ8NB25 1140 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 MKRN1Q9UHC7 482 aaKnown RBP10.03□□□□□ -0.8
TRIO-201ENST00000344135 MTMR7Q9Y216 660 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 LRRC37AA6NMS7 1700 aa10.03□□□□□ -0.8
TRIO-201ENST00000344135 USP48Q86UV5 1035 aa10.02□□□□□ -0.8
TRIO-201ENST00000344135 SMARCC2Q8TAQ2 1214 aa10.02□□□□□ -0.8
TRIO-201ENST00000344135 NUP133Q8WUM0 1156 aa10.02□□□□□ -0.8
TRIO-201ENST00000344135 COA1Q9GZY4 146 aa10.02□□□□□ -0.8
TRIO-201ENST00000344135 DAGLAQ9Y4D2 1042 aa10.02□□□□□ -0.8
TRIO-201ENST00000344135 TNKSO95271 1327 aa10.02□□□□□ -0.8
TRIO-201ENST00000344135 RHBDL3P58872 404 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.81
TRIO-201ENST00000344135 RASGRP2Q7LDG7 609 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
TRIO-201ENST00000344135 ZMYM6O95789 1325 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 METAP2P50579 478 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRIO-201ENST00000344135 EVCP57679 992 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 ENAHQ8N8S7 591 aaPredicted RBP10.02□□□□□ -0.81
TRIO-201ENST00000344135 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.81
TRIO-201ENST00000344135 ADAMTSL1Q8N6G6 1762 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 CPLX1O14810 134 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 ECE2O60344 883 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
TRIO-201ENST00000344135 TEX11Q8IYF3 940 aa10.02□□□□□ -0.81
TRIO-201ENST00000344135 RGPD3A6NKT7 1758 aaPredicted RBP10.01□□□□□ -0.81
TRIO-201ENST00000344135 RGPD4Q7Z3J3 1758 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 GOLGA6L22H0YM25 854 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 STYK1Q6J9G0 422 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 DDX4Q9NQI0 724 aaKnown RBP10.01□□□□□ -0.81
TRIO-201ENST00000344135 YDJCA8MPS7 323 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 H3BQV1 296 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 ZBTB43O43298 467 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 GUCY1A2P33402 732 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 NFIAQ12857 509 aa10.01□□□□□ -0.81
TRIO-201ENST00000344135 WTAPQ15007 396 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms