RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SH2D4AQ9H788 454 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 PCDH18Q9HCL0 1135 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 FAM53CQ9NYF3 392 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 MYBL2P10244 700 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SPATA1Q5VX52 437 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 WDHD1O75717 1129 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 KRT9P35527 623 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 PSMD6Q15008 389 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 STK38LQ9Y2H1 464 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 ZNF644Q9H582 1327 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 UBTFL6P0CB48 400 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 MATR3P43243 847 aaKnown RBP eCLIP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 LETM2Q2VYF4 491 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 C8orf74Q6P047 294 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TTC41PQ6P2S7 1318 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 PHBP35232 272 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 E2F4Q16254 413 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 HAUS1Q96CS2 278 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 STAMBPL1Q96FJ0 436 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SH3GL1Q99961 368 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 PAX7P23759 505 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 CUL4BQ13620 913 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SYCP2LQ5T4T6 812 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 LEO1Q8WVC0 666 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 NUP62CLQ9H1M0 184 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 NR2E3Q9Y5X4 410 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 MUM1Q2TAK8 710 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TACC3Q9Y6A5 838 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SMAPO00193 183 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 KRT85P78386 507 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 AGBL1Q96MI9 1066 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TTC1Q99614 292 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 IRAK4Q9NWZ3 460 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SEPT3Q9UH03 358 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 NDUFAB1O14561 156 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC14Q49A88 953 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 SHQ1Q6PI26 577 aaKnown RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 UBE2Q1Q7Z7E8 422 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 STX12Q86Y82 276 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 CFDP1Q9UEE9 299 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TAOK1Q7L7X3 1001 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 DYTNA2CJ06 578 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 ARID3CA6NKF2 412 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TPD52L2O43399 206 aaKnown RBP4.2□□□□□ -1.74
SYNE2-202ENST00000344113 TSPAN9O75954 239 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 KRT28Q7Z3Y7 464 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 MBD2Q9UBB5 411 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 LZTS1Q9Y250 596 aa4.2□□□□□ -1.74
SYNE2-202ENST00000344113 ERICH3Q5RHP9 1530 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 GOLGA6CA6NDK9 693 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 GOLGA6DP0CG33 693 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 RPS6KA3P51812 740 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 NUTM2GQ5VZR2 741 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 GOLGA6AQ9NYA3 693 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 EVC2Q86UK5 1308 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ESCO1Q5FWF5 840 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 RNF14Q9UBS8 474 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 H7C1W4 665 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 TNPO1Q92973 898 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ADAM21Q9UKJ8 722 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC88BA6NC98 1476 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 RTL1A6NKG5 1358 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PHLPP2Q6ZVD8 1323 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CTAGE3PQ8IX95 158 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 FYCO1Q9BQS8 1478 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 BOLA3Q53S33 107 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PEX5LQ8IYB4 626 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ATP6V1E2Q96A05 226 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 BCL2L13Q9BXK5 485 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PPP1R12CQ9BZL4 782 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 EPS15L1Q9UBC2 864 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 UNCXA6NJT0 531 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 KCNA2P16389 499 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PREPLQ4J6C6 727 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 HHATQ5VTY9 493 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 MSH6P52701 1360 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ARPC4P59998 168 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ZKSCAN2Q63HK3 967 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CAPRIN2Q6IMN6 1127 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CALCOCO2Q13137 446 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ZSCAN23Q3MJ62 389 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 GSDMBQ8TAX9 411 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 ECE1P42892 770 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 REREQ9P2R6 1566 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 AXIN1O15169 862 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 TRHP20396 242 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PDE1BQ01064 536 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 KRT82Q9NSB4 513 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 H2AFXP16104 143 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 DAB2P98082 770 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 RALYLQ86SE5 291 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 VPS37AQ8NEZ2 397 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CPLX1O14810 134 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 HSPA8P11142 646 aaKnown RBP4.19□□□□□ -1.74
SYNE2-202ENST00000344113 CMPK2Q5EBM0 449 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 UNC13DQ70J99 1090 aa4.19□□□□□ -1.74
SYNE2-202ENST00000344113 VPS16Q9H269 839 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms