RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 DDX60LQ5H9U9 1706 aaKnown RBP22.32■■□□□ 1.16
MUC1-204ENST00000343256 PTPRAP18433 802 aa22.32■■□□□ 1.16
MUC1-204ENST00000343256 TRIM32Q13049 653 aa22.32■■□□□ 1.16
MUC1-204ENST00000343256 SCYL3Q8IZE3 742 aa22.32■■□□□ 1.16
MUC1-204ENST00000343256 VGLL2Q8N8G2 317 aa22.32■■□□□ 1.16
MUC1-204ENST00000343256 COA7Q96BR5 231 aa22.32■■□□□ 1.16
MUC1-204ENST00000343256 UBE2OQ9C0C9 1292 aaKnown RBP22.32■■□□□ 1.16
MUC1-204ENST00000343256 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
MUC1-204ENST00000343256 AFG3L2Q9Y4W6 797 aa22.32■■□□□ 1.16
MUC1-204ENST00000343256 PHF20L1A8MW92 1017 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 SLURP2P0DP57 97 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 ANKLE1Q8NAG6 615 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
MUC1-204ENST00000343256 PICK1Q9NRD5 415 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.31■■□□□ 1.16
MUC1-204ENST00000343256 PTPRFP10586 1907 aa22.31■■□□□ 1.16
MUC1-204ENST00000343256 PDE8BO95263 885 aa22.3■■□□□ 1.16
MUC1-204ENST00000343256 C11orf49Q9H6J7 331 aa22.3■■□□□ 1.16
MUC1-204ENST00000343256 USP40Q9NVE5 1235 aa22.3■■□□□ 1.16
MUC1-204ENST00000343256 ATRNL1Q5VV63 1379 aa22.29■■□□□ 1.16
MUC1-204ENST00000343256 NBPF7P0C2Y1 421 aaPredicted RBP22.29■■□□□ 1.16
MUC1-204ENST00000343256 CCDC27Q2M243 656 aa22.29■■□□□ 1.16
MUC1-204ENST00000343256 CCDC84Q86UT8 332 aaPredicted RBP22.29■■□□□ 1.16
MUC1-204ENST00000343256 KLHDC4Q8TBB5 520 aa22.29■■□□□ 1.16
MUC1-204ENST00000343256 SLC45A1Q9Y2W3 748 aa22.29■■□□□ 1.16
MUC1-204ENST00000343256 MYH13Q9UKX3 1938 aa22.29■■□□□ 1.16
MUC1-204ENST00000343256 TRIM75PA6NK02 468 aa22.28■■□□□ 1.16
MUC1-204ENST00000343256 HMGCRP04035 888 aa22.28■■□□□ 1.16
MUC1-204ENST00000343256 EXOSC9Q06265 439 aaKnown RBP22.28■■□□□ 1.16
MUC1-204ENST00000343256 BICC1Q9H694 974 aaKnown RBP22.28■■□□□ 1.16
MUC1-204ENST00000343256 DOCK2Q92608 1830 aa22.28■■□□□ 1.16
MUC1-204ENST00000343256 PHIPQ8WWQ0 1821 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 ALDH1L1O75891 902 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 PRDX5P30044 214 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 ZEB1P37275 1124 aaPredicted RBP22.27■■□□□ 1.16
MUC1-204ENST00000343256 GUCD1Q96NT3 240 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 SRCIN1Q9C0H9 1055 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 HMX1Q9NP08 348 aaPredicted RBP22.27■■□□□ 1.16
MUC1-204ENST00000343256 IL16Q14005 1332 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 RPTORQ8N122 1335 aa22.27■■□□□ 1.16
MUC1-204ENST00000343256 TREML2Q5T2D2 321 aa22.26■■□□□ 1.15
MUC1-204ENST00000343256 WDR66Q8TBY9 1149 aa22.26■■□□□ 1.15
MUC1-204ENST00000343256 FAM161BQ96MY7 647 aa22.26■■□□□ 1.15
MUC1-204ENST00000343256 AGTPBP1Q9UPW5 1226 aa22.26■■□□□ 1.15
MUC1-204ENST00000343256 PFASO15067 1338 aa22.26■■□□□ 1.15
MUC1-204ENST00000343256 IFIT1P09914 478 aaKnown RBP22.25■■□□□ 1.15
MUC1-204ENST00000343256 FGFR2P21802 821 aa22.25■■□□□ 1.15
MUC1-204ENST00000343256 SH3BP5LQ7L8J4 393 aa22.25■■□□□ 1.15
MUC1-204ENST00000343256 LRRFIP2Q9Y608 721 aaKnown RBP22.25■■□□□ 1.15
MUC1-204ENST00000343256 VCANP13611 3396 aa22.24■■□□□ 1.15
MUC1-204ENST00000343256 DOCK1Q14185 1865 aa22.24■■□□□ 1.15
MUC1-204ENST00000343256 RGS3P49796 1198 aa22.24■■□□□ 1.15
MUC1-204ENST00000343256 MDM2Q00987 491 aaPredicted RBP22.24■■□□□ 1.15
MUC1-204ENST00000343256 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
MUC1-204ENST00000343256 FAM110CQ1W6H9 321 aa22.24■■□□□ 1.15
MUC1-204ENST00000343256 ANKRD44Q8N8A2 993 aa22.24■■□□□ 1.15
MUC1-204ENST00000343256 RABL6Q3YEC7 729 aaPredicted RBP22.23■■□□□ 1.15
MUC1-204ENST00000343256 ZSCAN29Q8IWY8 852 aaPredicted RBP22.23■■□□□ 1.15
MUC1-204ENST00000343256 GJD2Q9UKL4 321 aa22.23■■□□□ 1.15
MUC1-204ENST00000343256 OGDHLQ9ULD0 1010 aa22.23■■□□□ 1.15
MUC1-204ENST00000343256 TRIB2Q92519 343 aa22.22■■□□□ 1.15
MUC1-204ENST00000343256 KIF16BQ96L93 1317 aa22.22■■□□□ 1.15
MUC1-204ENST00000343256 DDTLA6NHG4 134 aaPredicted RBP22.21■■□□□ 1.15
MUC1-204ENST00000343256 POTEB2H3BUK9 544 aa22.21■■□□□ 1.15
MUC1-204ENST00000343256 LDHBP07195 334 aaKnown RBP22.21■■□□□ 1.15
MUC1-204ENST00000343256 PNMA3Q9UL41 463 aa22.21■■□□□ 1.15
MUC1-204ENST00000343256 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
MUC1-204ENST00000343256 PLXNB2O15031 1838 aa22.2■■□□□ 1.14
MUC1-204ENST00000343256 CTNND1O60716 968 aaKnown RBP22.2■■□□□ 1.14
MUC1-204ENST00000343256 SLC5A1P13866 664 aa22.2■■□□□ 1.14
MUC1-204ENST00000343256 UTYO14607 1347 aa22.2■■□□□ 1.14
MUC1-204ENST00000343256 ENTPD3O75355 529 aa22.19■■□□□ 1.14
MUC1-204ENST00000343256 CYP2B6P20813 491 aa22.19■■□□□ 1.14
MUC1-204ENST00000343256 CCDC184Q52MB2 194 aa22.19■■□□□ 1.14
MUC1-204ENST00000343256 IDI2Q9BXS1 227 aa22.19■■□□□ 1.14
MUC1-204ENST00000343256 PRKAR2AP13861 404 aaKnown RBP22.18■■□□□ 1.14
MUC1-204ENST00000343256 MAP3K10Q02779 954 aa22.18■■□□□ 1.14
MUC1-204ENST00000343256 LRRC26Q2I0M4 334 aa22.18■■□□□ 1.14
MUC1-204ENST00000343256 DDX4Q9NQI0 724 aaKnown RBP22.18■■□□□ 1.14
MUC1-204ENST00000343256 MYH2Q9UKX2 1941 aa22.18■■□□□ 1.14
MUC1-204ENST00000343256 RFX7Q2KHR2 1363 aa22.17■■□□□ 1.14
MUC1-204ENST00000343256 FAM196BA6NMK8 535 aa22.17■■□□□ 1.14
MUC1-204ENST00000343256 PICALMQ13492 652 aa22.17■■□□□ 1.14
MUC1-204ENST00000343256 FAM109BQ6ICB4 259 aaPredicted RBP22.17■■□□□ 1.14
MUC1-204ENST00000343256 LPIN2Q92539 896 aa22.17■■□□□ 1.14
MUC1-204ENST00000343256 SPTBN5Q9NRC6 3674 aaKnown RBP22.17■■□□□ 1.14
MUC1-204ENST00000343256 PEX10O60683 326 aa22.16■■□□□ 1.14
MUC1-204ENST00000343256 COL6A1P12109 1028 aa22.16■■□□□ 1.14
MUC1-204ENST00000343256 GCLCP48506 637 aaPredicted RBP22.16■■□□□ 1.14
MUC1-204ENST00000343256 SPP2Q13103 211 aa22.16■■□□□ 1.14
MUC1-204ENST00000343256 MAP3K21Q5TCX8 1036 aa22.16■■□□□ 1.14
MUC1-204ENST00000343256 COL2A1P02458 1487 aaPredicted RBP22.15■■□□□ 1.14
MUC1-204ENST00000343256 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
MUC1-204ENST00000343256 HMGCS2P54868 508 aa22.15■■□□□ 1.14
MUC1-204ENST00000343256 PROCA1Q8NCQ7 364 aaPredicted RBP22.15■■□□□ 1.14
MUC1-204ENST00000343256 ASCC2Q9H1I8 757 aaPredicted RBP22.15■■□□□ 1.14
MUC1-204ENST00000343256 PRDM6Q9NQX0 595 aa22.15■■□□□ 1.14
MUC1-204ENST00000343256 EYSQ5T1H1 3165 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms