RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 TTLL3Q9Y4R7 772 aa9.28□□□□□ -0.92
CAST-204ENST00000341926 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.92
CAST-204ENST00000341926 NAIPQ13075 1403 aa9.27□□□□□ -0.92
CAST-204ENST00000341926 ZSCAN12O43309 604 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 MGRN1O60291 552 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 KDM1AO60341 852 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 ATICP31939 592 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 TCF7P36402 384 aaPredicted RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 CLCN2P51788 898 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 ARPC4P59998 168 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 CCDC152Q4G0S7 254 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 CREB3L3Q68CJ9 461 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 NCCRP1Q6ZVX7 275 aaPredicted RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 B4GALNT4Q76KP1 1039 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 HDXQ7Z353 690 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 CEP57Q86XR8 500 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 SLC7A5P1Q8MH63 180 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 C1orf131Q8NDD1 294 aaKnown RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 CTNNBL1Q8WYA6 563 aaPredicted RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 MAML3Q96JK9 1138 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 NLRP2Q9NX02 1062 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 TFIP11Q9UBB9 837 aaKnown RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.27□□□□□ -0.93
CAST-204ENST00000341926 SIGLEC1Q9BZZ2 1709 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 ARHGEF12Q9NZN5 1544 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 DRP2Q13474 957 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 USH1GQ495M9 461 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.27□□□□□ -0.93
CAST-204ENST00000341926 PLA2G4DQ86XP0 818 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 SLC15A3Q8IY34 581 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 KIRREL3Q8IZU9 778 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
CAST-204ENST00000341926 CLIC6Q96NY7 704 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 IWS1Q96ST2 819 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 CCDC68Q9H2F9 335 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 VCPKMTQ9H867 229 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 COMMD8Q9NX08 183 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 ATXN10Q9UBB4 475 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.27□□□□□ -0.93
CAST-204ENST00000341926 SLC30A1Q9Y6M5 507 aa9.27□□□□□ -0.93
CAST-204ENST00000341926 PHLPP2Q6ZVD8 1323 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 FHOD3Q2V2M9 1422 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 RAB11FIP3O75154 756 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 LINGO3P0C6S8 592 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 RPL17P18621 184 aaKnown RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 MCM2P49736 904 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 OXCT1P55809 520 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 ACTN3Q08043 901 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 CBX3Q13185 183 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 DHX8Q14562 1220 aaKnown RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 ARHGEF6Q15052 776 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 CCDC40Q4G0X9 1142 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 NANOGNBQ7Z5D8 188 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 TMEM87AQ8NBN3 555 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 CACTINQ8WUQ7 758 aaKnown RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 CLIP3Q96DZ5 547 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 PAGR1Q9BTK6 254 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 EBF2Q9HAK2 575 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 PDE11AQ9HCR9 933 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 HELLSQ9NRZ9 838 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 C6orf203Q9P0P8 240 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 FYCO1Q9BQS8 1478 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 ZFYVE16Q7Z3T8 1539 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 MED1Q15648 1581 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 ABLIM1O14639 778 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 KIAA0754O94854 1291 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 CCDC166P0CW27 439 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 ATP5JP18859 108 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 PSMC4P43686 418 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 KCNJ6P48051 423 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 GNAQP50148 359 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 BLMHQ13867 455 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 LRRFIP1Q32MZ4 808 aaKnown RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 NAA16Q6N069 864 aaPredicted RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 ARHGEF25Q86VW2 580 aa9.26□□□□□ -0.93
CAST-204ENST00000341926 SREK1Q8WXA9 508 aaKnown RBP9.26□□□□□ -0.93
CAST-204ENST00000341926 MAGI2Q86UL8 1455 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 TBKBP1A7MCY6 615 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 P4HA2O15460 535 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 CNGA1P29973 690 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 CCT5P48643 541 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 CTAG1AP78358 180 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 LMNTD2Q8IXW0 634 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 ZNF280CQ8ND82 737 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 LRRN4CLQ8ND94 238 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 GCC1Q96CN9 775 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 MRPL46Q9H2W6 279 aaKnown RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 GALNT8Q9NY28 637 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 AATFQ9NY61 560 aaKnown RBP eCLIP9.25□□□□□ -0.93
CAST-204ENST00000341926 MYO1AQ9UBC5 1043 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 CIDEBQ9UHD4 219 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms