RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 LMAN1P49257 510 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 UBXN1Q04323 297 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 ZMYM1Q5SVZ6 1142 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 GRAMD1CQ8IYS0 662 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 GPCPD1Q9NPB8 672 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
CDH5-201ENST00000341529 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
CDH5-201ENST00000341529 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 TMEM87BQ96K49 555 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 CARD6Q9BX69 1037 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 EIF3JO75822 258 aaKnown RBP13.59□□□□□ -0.23
CDH5-201ENST00000341529 CDC25AP30304 524 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
CDH5-201ENST00000341529 CTNND2Q9UQB3 1225 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 TAX1BP1Q86VP1 789 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 ZBTB38Q8NAP3 1195 aaPredicted RBP13.59□□□□□ -0.23
CDH5-201ENST00000341529 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
CDH5-201ENST00000341529 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
CDH5-201ENST00000341529 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
CDH5-201ENST00000341529 TOB2Q14106 344 aaPredicted RBP13.58□□□□□ -0.23
CDH5-201ENST00000341529 ZNF654Q8IZM8 581 aa13.58□□□□□ -0.23
CDH5-201ENST00000341529 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.23
CDH5-201ENST00000341529 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.23
CDH5-201ENST00000341529 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 PDE8BO95263 885 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 GOLGA8HP0CJ92 632 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 NR5A1Q13285 461 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 PRPF4BQ13523 1007 aaKnown RBP13.58□□□□□ -0.24
CDH5-201ENST00000341529 RILPL1Q5EBL4 403 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 CPS1P31327 1500 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 TMCO5BA8MYB1 307 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 DEXIO95424 95 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 GNAT2P19087 354 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
CDH5-201ENST00000341529 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 IGSF22Q8N9C0 903 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 PSMB7Q99436 277 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 FANCLQ9NW38 375 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 DIP2CQ9Y2E4 1556 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 ADALQ6DHV7 355 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 DTHD1Q6ZMT9 781 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 IQUBQ8NA54 791 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 PIGBQ92521 554 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
CDH5-201ENST00000341529 PSMA7O14818 248 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 TAF4BQ92750 862 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 LUC7LQ9NQ29 371 aaKnown RBP13.57□□□□□ -0.24
CDH5-201ENST00000341529 CCDC175P0C221 793 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 HLTFQ14527 1009 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDH5-201ENST00000341529 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
CDH5-201ENST00000341529 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
CDH5-201ENST00000341529 USP21Q9UK80 565 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 ZNF215Q9UL58 517 aaPredicted RBP13.57□□□□□ -0.24
CDH5-201ENST00000341529 ADGRB3O60242 1522 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 TFAP4Q01664 338 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 SCARF1Q14162 830 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 FAM107BQ9H098 131 aa13.57□□□□□ -0.24
CDH5-201ENST00000341529 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
CDH5-201ENST00000341529 ARAP3Q8WWN8 1544 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 MACROD2A1Z1Q3 448 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 ZNF500O60304 480 aaPredicted RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 UFL1O94874 794 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 DYNLL1P63167 89 aaKnown RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 GPKOWQ92917 476 aaPredicted RBP eCLIP13.56□□□□□ -0.24
CDH5-201ENST00000341529 TSG101Q99816 390 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 ZC3H12CQ9C0D7 883 aaKnown RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 PCDHA5Q9Y5H7 936 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 TNKSO95271 1327 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 TXKP42681 527 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 EVCP57679 992 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 ARHGEF40Q8TER5 1519 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
CDH5-201ENST00000341529 TTC38Q5R3I4 469 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 MSL1Q68DK7 614 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 FEZ1Q99689 392 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 ARFGAP3Q9NP61 516 aa13.56□□□□□ -0.24
CDH5-201ENST00000341529 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms