RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SCAND2PQ9GZW5 306 aaPredicted RBP14.67□□□□□ -0.06
LIN54-201ENST00000340417 PPARAQ07869 468 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 ZNF592Q92610 1267 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 NBPF3Q9H094 633 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 CCDC192P0DO97 292 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
LIN54-201ENST00000340417 SDR42E1Q8WUS8 393 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 TMEM87BQ96K49 555 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 PANK2Q9BZ23 570 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 NUP62CLQ9H1M0 184 aa14.67□□□□□ -0.06
LIN54-201ENST00000340417 PODNQ7Z5L7 613 aa14.66□□□□□ -0.06
LIN54-201ENST00000340417 RNF214Q8ND24 703 aa14.66□□□□□ -0.06
LIN54-201ENST00000340417 PDE6AP16499 860 aa14.66□□□□□ -0.06
LIN54-201ENST00000340417 ADORA1P30542 326 aa14.66□□□□□ -0.06
LIN54-201ENST00000340417 SSR1P43307 286 aaKnown RBP14.66□□□□□ -0.06
LIN54-201ENST00000340417 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
LIN54-201ENST00000340417 TTC16Q8NEE8 873 aa14.66□□□□□ -0.06
LIN54-201ENST00000340417 TRIM75PA6NK02 468 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 PLEKHM2Q8IWE5 1019 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 LPXNO60711 386 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 TCERG1LQ5VWI1 586 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 KRT79Q5XKE5 535 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 SP8Q8IXZ3 490 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 TTLL11Q8NHH1 800 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 SASH1O94885 1247 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 PPM1FP49593 454 aaPredicted RBP14.65□□□□□ -0.06
LIN54-201ENST00000340417 TAF12Q16514 161 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 PNMA3Q9UL41 463 aa14.65□□□□□ -0.06
LIN54-201ENST00000340417 SPOUT1Q5T280 376 aaKnown RBP14.65□□□□□ -0.06
LIN54-201ENST00000340417 CHMP2AO43633 222 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 CHMLP26374 656 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 ARHGEF16Q5VV41 709 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 TSPY26PQ9H489 355 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 SWAP70Q9UH65 585 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 NRXN1Q9ULB1 1477 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 PHACTR2O75167 634 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 COPRSQ9NQ92 184 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 PNMA2Q9UL42 364 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 FKBP15Q5T1M5 1219 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 LZTS2Q9BRK4 669 aa14.64□□□□□ -0.07
LIN54-201ENST00000340417 DHX36Q9H2U1 1008 aaKnown RBP14.64□□□□□ -0.07
LIN54-201ENST00000340417 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
LIN54-201ENST00000340417 FERMT2Q96AC1 680 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 CCDC17Q96LX7 622 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 FAM227BQ96M60 508 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 DKC1O60832 514 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIN54-201ENST00000340417 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 MLXIPQ9HAP2 919 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 PLEKHG2Q9H7P9 1386 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 FAM13AO94988 1023 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 STAT6P42226 847 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 USP37Q86T82 979 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 GDF11O95390 407 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 ZNRF3Q9ULT6 936 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 DDX39AO00148 427 aaKnown RBP14.63□□□□□ -0.07
LIN54-201ENST00000340417 RFX1P22670 979 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 CCDC40Q4G0X9 1142 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 NLRX1Q86UT6 975 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 SSH3Q8TE77 659 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 EXOC1Q9NV70 894 aa14.63□□□□□ -0.07
LIN54-201ENST00000340417 CRKP46108 304 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 GPSM2P81274 684 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 PDE4DQ08499 809 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 GOLGA6L1Q8N7Z2 621 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 CELF1Q92879 486 aaKnown RBP14.62□□□□□ -0.07
LIN54-201ENST00000340417 AOX1Q06278 1338 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 CD163L1Q9NR16 1453 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 CBFA2T2O43439 604 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 MCM7P33993 719 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 LETM2Q2VYF4 491 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 ADCY7P51828 1080 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 TXLNBQ8N3L3 684 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 PUF60Q9UHX1 559 aaKnown RBP14.62□□□□□ -0.07
LIN54-201ENST00000340417 ANAPC15P60006 121 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 SLFN13Q68D06 897 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 EP400NLQ6ZTU2 488 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 MINPP1Q9UNW1 487 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 COL23A1Q86Y22 540 aaPredicted RBP14.62□□□□□ -0.07
LIN54-201ENST00000340417 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
LIN54-201ENST00000340417 ITPK1Q13572 414 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 EDC3Q96F86 508 aaKnown RBP14.61□□□□□ -0.07
LIN54-201ENST00000340417 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
LIN54-201ENST00000340417 MRPL11Q9Y3B7 192 aaKnown RBP14.61□□□□□ -0.07
LIN54-201ENST00000340417 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 IFNL3Q8IZI9 196 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 CAGE1Q8TC20 777 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 FRMPD2Q68DX3 1309 aaPredicted RBP14.61□□□□□ -0.07
LIN54-201ENST00000340417 CNTNAP4Q9C0A0 1308 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 MYO3AQ8NEV4 1616 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 EAF2Q96CJ1 260 aaPredicted RBP14.61□□□□□ -0.07
LIN54-201ENST00000340417 ZNF341Q9BYN7 854 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 ABCC4O15439 1325 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 HSP90AA2PQ14568 343 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms