RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 STX8Q9UNK0 236 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 TACC3Q9Y6A5 838 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 TNKSO95271 1327 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 GRIK5Q16478 980 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 PDILTQ8N807 584 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 SLC44A5Q8NCS7 719 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 MKNK2Q9HBH9 465 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 PAPPAQ13219 1627 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 IFIT1BQ5T764 474 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 KRT40Q6A162 431 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 SPATA31A6Q5VVP1 1343 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 KRT23Q9C075 422 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 MYO5AQ9Y4I1 1855 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 ADCY5O95622 1261 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 C17orf53Q8N3J3 647 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 ESR2Q92731 530 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 ANKRD2Q9GZV1 360 aa11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 ZSCAN16Q9H4T2 348 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-202ENST00000340209 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 TYRO3Q06418 890 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 HSP90AA4PQ58FG1 418 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 RBM5P52756 815 aaKnown RBP eCLIP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 GPSM2P81274 684 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 SAFBQ15424 915 aaKnown RBP eCLIP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 LLPHQ9BRT6 129 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 VPS54Q9P1Q0 977 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 SPEF2Q9C093 1822 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 BECN2A8MW95 431 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 CDKL5O76039 1030 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 SCNN1DP51172 638 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 IQCA1Q86XH1 822 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 FAM43AQ8N2R8 423 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 COL4A1P02462 1669 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 GTF2IP78347 998 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 ZNF654Q8IZM8 581 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 CLIC6Q96NY7 704 aa11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 TMX4Q9H1E5 349 aaPredicted RBP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 RNF41Q9H4P4 317 aaPredicted RBP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
RBFOX1-202ENST00000340209 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 GYS1P13807 737 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 NR5A1Q13285 461 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 TRIM5Q9C035 493 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 GOLPH3LQ9H4A5 285 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 VAT1LQ9HCJ6 419 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 GNAT2P19087 354 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 CNNM2Q9H8M5 875 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 ZMYM6O95789 1325 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 GRAPQ13588 217 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 ARID3AQ99856 593 aa11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-202ENST00000340209 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 HOMER1Q86YM7 354 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 GOLGA6L19H0YKK7 550 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 SPTLC2O15270 562 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 CATIPQ7Z7H3 387 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 PCDHA7Q9UN72 937 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 AMOTL1Q8IY63 956 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 IGDCC4Q8TDY8 1250 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 ZNF384Q8TF68 577 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
RBFOX1-202ENST00000340209 GOLGA8HP0CJ92 632 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 CREBRFQ8IUR6 639 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 DIS3L2Q8IYB7 885 aaKnown RBP11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 MMP10P09238 476 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 ZNF165P49910 485 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 DDR1Q08345 913 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 RASGRP2Q7LDG7 609 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 MYH3P11055 1940 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 USP17L3A6NCW0 530 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 USP17L4A6NCW7 530 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 USP17L1Q7RTZ2 530 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 TMEM87AQ8NBN3 555 aa11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 ALDH8A1Q9H2A2 487 aaPredicted RBP11.78□□□□□ -0.52
RBFOX1-202ENST00000340209 FAM205CA6NFA0 338 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms