RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 TRPM4Q8TD43 1214 aa17.58■□□□□ 0.4
CSRP1-201ENST00000340006 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.4
CSRP1-201ENST00000340006 TBC1D32Q96NH3 1257 aa17.58■□□□□ 0.4
CSRP1-201ENST00000340006 CDK5RAP2Q96SN8 1893 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 USP17L12C9JPN9 530 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 USP17L21D6R901 530 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 FOXP2O15409 715 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 EPB41L2O43491 1005 aaKnown RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 NFIAQ12857 509 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 ALX1Q15699 326 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 SPDYE2Q495Y8 402 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 FLT1P17948 1338 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 HIRAP54198 1017 aaPredicted RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 HAND2P61296 217 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
CSRP1-201ENST00000340006 PALD1Q9ULE6 856 aa17.57■□□□□ 0.4
CSRP1-201ENST00000340006 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
CSRP1-201ENST00000340006 NECTIN1Q15223 517 aa17.56■□□□□ 0.4
CSRP1-201ENST00000340006 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
CSRP1-201ENST00000340006 USP50Q70EL3 339 aaPredicted RBP17.56■□□□□ 0.4
CSRP1-201ENST00000340006 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
CSRP1-201ENST00000340006 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
CSRP1-201ENST00000340006 MYH1P12882 1939 aa17.56■□□□□ 0.4
CSRP1-201ENST00000340006 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 VEGFAP15692 232 aaPredicted RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 TNNI2P48788 182 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 ANGEL2Q5VTE6 544 aaKnown RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 ASTN2O75129 1339 aaPredicted RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 SCN4AP35499 1836 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 HSPA4P34932 840 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 ZFPM1Q8IX07 1006 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 TAF1DQ9H5J8 278 aaPredicted RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 FAM198AQ9UFP1 575 aa17.55■□□□□ 0.4
CSRP1-201ENST00000340006 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
CSRP1-201ENST00000340006 CYP2D7A0A087X1C5 515 aa17.54■□□□□ 0.4
CSRP1-201ENST00000340006 POTECB2RU33 542 aa17.54■□□□□ 0.4
CSRP1-201ENST00000340006 SLC27A2O14975 620 aa17.54■□□□□ 0.4
CSRP1-201ENST00000340006 DCPSQ96C86 337 aaKnown RBP17.54■□□□□ 0.4
CSRP1-201ENST00000340006 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
CSRP1-201ENST00000340006 ENTPD3O75355 529 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 CYP21A2P08686 494 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 TNFAIP1Q13829 316 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 TTC6Q86TZ1 520 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 SLC3A2P08195 630 aaKnown RBP17.53■□□□□ 0.4
CSRP1-201ENST00000340006 CYP2D6P10635 497 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 PPARAQ07869 468 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 FAM151AQ8WW52 585 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
CSRP1-201ENST00000340006 GGA3Q9NZ52 723 aa17.53■□□□□ 0.4
CSRP1-201ENST00000340006 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
CSRP1-201ENST00000340006 HLA-DOAP06340 250 aa17.52■□□□□ 0.4
CSRP1-201ENST00000340006 PLCD1P51178 756 aa17.52■□□□□ 0.4
CSRP1-201ENST00000340006 RASA3Q14644 834 aa17.52■□□□□ 0.4
CSRP1-201ENST00000340006 SBK1Q52WX2 424 aa17.52■□□□□ 0.4
CSRP1-201ENST00000340006 ZMYM6O95789 1325 aa17.52■□□□□ 0.39
CSRP1-201ENST00000340006 WDR90Q96KV7 1748 aa17.52■□□□□ 0.39
CSRP1-201ENST00000340006 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
CSRP1-201ENST00000340006 C12orf60Q5U649 245 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 FAM83AQ86UY5 434 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 APOBEC3FQ8IUX4 373 aaKnown RBP17.51■□□□□ 0.39
CSRP1-201ENST00000340006 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 TMEM39BQ9GZU3 492 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 DEFB129Q9H1M3 183 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 PI4KBQ9UBF8 816 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
CSRP1-201ENST00000340006 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
CSRP1-201ENST00000340006 MFSD6Q6ZSS7 791 aa17.5■□□□□ 0.39
CSRP1-201ENST00000340006 SULF1Q8IWU6 871 aa17.5■□□□□ 0.39
CSRP1-201ENST00000340006 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
CSRP1-201ENST00000340006 NMRK2Q9NPI5 230 aa17.5■□□□□ 0.39
CSRP1-201ENST00000340006 SMIM22K7EJ46 135 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 PDE4BQ07343 736 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 TRDNQ13061 729 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 CRACR2BQ8N4Y2 399 aaPredicted RBP17.49■□□□□ 0.39
CSRP1-201ENST00000340006 CSRNP1Q96S65 589 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 INCENPQ9NQS7 918 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 E7EWF7 191 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 EVX2Q03828 476 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 KRT32Q14532 448 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
CSRP1-201ENST00000340006 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 DYNLL2Q96FJ2 89 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 RNF41Q9H4P4 317 aaPredicted RBP17.49■□□□□ 0.39
CSRP1-201ENST00000340006 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms