RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 SBF1O95248 1867 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 MYH3P11055 1940 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 LMNB1P20700 586 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 ITGA6P23229 1130 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 GPSM2P81274 684 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
ZNF28-201ENST00000339844 CCDC183Q5T5S1 534 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 CC2D2BQ6DHV5 1058 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 TICAM2Q86XR7 235 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 SP8Q8IXZ3 490 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 RTKN2Q8IZC4 609 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 BICC1Q9H694 974 aaKnown RBP7.53□□□□□ -1.2
ZNF28-201ENST00000339844 SH2B1Q9NRF2 756 aaPredicted RBP7.53□□□□□ -1.2
ZNF28-201ENST00000339844 ZNF277Q9NRM2 450 aaPredicted RBP7.53□□□□□ -1.2
ZNF28-201ENST00000339844 TSR3Q9UJK0 312 aaKnown RBP7.53□□□□□ -1.2
ZNF28-201ENST00000339844 LIMCH1Q9UPQ0 1083 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 COL4A5P29400 1685 aa7.53□□□□□ -1.2
ZNF28-201ENST00000339844 TTC41PQ6P2S7 1318 aa7.52□□□□□ -1.2
ZNF28-201ENST00000339844 DUOX1Q9NRD9 1551 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 MOXD2PA6NHM9 499 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 WTIPA6NIX2 430 aaPredicted RBP7.52□□□□□ -1.21
ZNF28-201ENST00000339844 HIP1O00291 1037 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 SGSM2O43147 1006 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 NDUFV2P19404 249 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 UBE2HP62256 183 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 KIAA2012Q0VF49 1180 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 RABL6Q3YEC7 729 aaPredicted RBP7.52□□□□□ -1.21
ZNF28-201ENST00000339844 ANKRD18AQ8IVF6 992 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 PROCA1Q8NCQ7 364 aaPredicted RBP7.52□□□□□ -1.21
ZNF28-201ENST00000339844 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
ZNF28-201ENST00000339844 GPR101Q96P66 508 aaPredicted RBP7.52□□□□□ -1.21
ZNF28-201ENST00000339844 CDC5LQ99459 802 aaKnown RBP7.52□□□□□ -1.21
ZNF28-201ENST00000339844 PSMD1Q99460 953 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 CHMP3Q9Y3E7 222 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.21
ZNF28-201ENST00000339844 ANKRD18BA2A2Z9 1011 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 GLRX3O76003 335 aaKnown RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 UBTFL1P0CB47 393 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 ZSCAN22P10073 491 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 FDX1P10109 184 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 IARSP41252 1262 aaKnown RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 FUT2Q10981 343 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 MTX1Q13505 466 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 PKP1Q13835 747 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 RSBN1LQ6PCB5 846 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 DPP8Q6V1X1 898 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 USP48Q86UV5 1035 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 ERC1Q8IUD2 1116 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 MPNDQ8N594 471 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 ZNF784Q8NCA9 323 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 TTC14Q96N46 770 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 RTFDC1Q9BY42 306 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 ANO2Q9NQ90 1003 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 BSDC1Q9NW68 430 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 POLLQ9UGP5 575 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 USP25Q9UHP3 1055 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 MINPP1Q9UNW1 487 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 NSFL1CQ9UNZ2 370 aaKnown RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 LRRFIP2Q9Y608 721 aaKnown RBP7.51□□□□□ -1.21
ZNF28-201ENST00000339844 LTBP1Q14766 1721 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 CCDC88AQ3V6T2 1871 aa7.51□□□□□ -1.21
ZNF28-201ENST00000339844 AK9Q5TCS8 1911 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 SYCE3A1L190 88 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 SPTLC1O15269 473 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 HOXA2O43364 376 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 PDCP20941 246 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 GTF2F1P35269 517 aaKnown RBP eCLIP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 IGHMBP2P38935 993 aaKnown RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 RFX5P48382 616 aaPredicted RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 IFIT5Q13325 482 aaKnown RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 AOC3Q16853 763 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 CCDC57Q2TAC2 916 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 VPS53Q5VIR6 699 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 KLHDC4Q8TBB5 520 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 TBC1D16Q8TBP0 767 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 RHPN1Q8TCX5 695 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 ZNF526Q8TF50 670 aaPredicted RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 RILPL2Q969X0 211 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 PUS3Q9BZE2 481 aaKnown RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 TMX4Q9H1E5 349 aaPredicted RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 PODXL2Q9NZ53 605 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 LIMD1Q9UGP4 676 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 EXOC6BQ9Y2D4 811 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 R3HCC1Q9Y3T6 440 aaKnown RBP7.5□□□□□ -1.21
ZNF28-201ENST00000339844 SPEF2Q9C093 1822 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 CCDC171Q6TFL3 1326 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 RAD50Q92878 1312 aa7.5□□□□□ -1.21
ZNF28-201ENST00000339844 PNMA6EA0A0J9YXQ4 647 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 GOLGA6L6A8MZA4 724 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 C6orf229H3BNL8 230 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 SNAP23O00161 211 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 PPIP5K2O43314 1243 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 STX6O43752 255 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 UFL1O94874 794 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 CAVIN2O95810 425 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 KLRK1P26718 216 aa7.49□□□□□ -1.21
ZNF28-201ENST00000339844 PSMA5P28066 241 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms