RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 LIG3P49916 1009 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 SKIDA1Q1XH10 827 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 LONRF3Q496Y0 759 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 KSR2Q6VAB6 950 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 EP400NLQ6ZTU2 488 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 BANK1Q8NDB2 785 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 ANKRD20A12PQ8NF67 263 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 TEX13AQ9BXU3 409 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 DBNLQ9UJU6 430 aaKnown RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 ANKARQ7Z5J8 1434 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 RFX7Q2KHR2 1363 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CEMIPQ8WUJ3 1361 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CTAGE15A4D2H0 777 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CTAGE9A4FU28 777 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 GRM8O00222 908 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CTAGE8P0CG41 777 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 FMR1Q06787 632 aaKnown RBP eCLIP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 RASGRP2Q7LDG7 609 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CTAGE6Q86UF2 777 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CTAGE4Q8IX94 777 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 MRC1P22897 1456 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CCDC196A0A1B0GTZ2 297 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 AKR1B15C9JRZ8 316 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 KIF23Q02241 960 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 WHAMMP3Q1A5X7 153 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 SLC35F6Q8N357 371 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 FBXL16Q8N461 479 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 CTCFLQ8NI51 663 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 MED15Q96RN5 788 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-201ENST00000339754 RAI14Q9P0K7 980 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 NFE2L3Q9Y4A8 694 aa10.72□□□□□ -0.69
NECAP1-201ENST00000339754 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.69
NECAP1-201ENST00000339754 ABL1P00519 1130 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 MNAT1P51948 309 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 PIP4K2BP78356 416 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 PTPAQ15257 358 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 FBXW10Q5XX13 1052 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 ABTB2Q8N961 1025 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 LGR6Q9HBX8 967 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.69
NECAP1-201ENST00000339754 HPCAL4Q9UM19 191 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 SUFUQ9UMX1 484 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 FAM169AQ9Y6X4 670 aa10.71□□□□□ -0.69
NECAP1-201ENST00000339754 FOXN1O15353 648 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 PPP6R2O75170 966 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 IRAK1P51617 712 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 PROSER3Q2NL68 480 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 RESP18Q5W5W9 173 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 ENOX1Q8TC92 643 aaKnown RBP10.71□□□□□ -0.7
NECAP1-201ENST00000339754 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.7
NECAP1-201ENST00000339754 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.7
NECAP1-201ENST00000339754 DSCC1Q9BVC3 393 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.7
NECAP1-201ENST00000339754 SETD1BQ9UPS6 1966 aaKnown RBP10.7□□□□□ -0.7
NECAP1-201ENST00000339754 SH3TC1Q8TE82 1336 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 PIK3C2AO00443 1686 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 CCT5P48643 541 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 AMPD2Q01433 879 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 ESCO1Q5FWF5 840 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 RPAINQ86UA6 219 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 LINS1Q8NG48 757 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 CDC5LQ99459 802 aaKnown RBP10.7□□□□□ -0.7
NECAP1-201ENST00000339754 HAUS7Q99871 368 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 NAA15Q9BXJ9 866 aaKnown RBP10.7□□□□□ -0.7
NECAP1-201ENST00000339754 KAT14Q9H8E8 782 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 SAMSN1Q9NSI8 373 aaKnown RBP10.7□□□□□ -0.7
NECAP1-201ENST00000339754 A0A1B0GTH6 734 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 TEX33O43247 280 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 KIF1CO43896 1103 aaKnown RBP10.7□□□□□ -0.7
NECAP1-201ENST00000339754 RBL2Q08999 1139 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 CCDC102BQ68D86 513 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
NECAP1-201ENST00000339754 MAN1B1Q9UKM7 699 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
NECAP1-201ENST00000339754 AGPSO00116 658 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 EBAG9O00559 213 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 TNNI3KQ59H18 835 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-201ENST00000339754 DDX46Q7L014 1031 aaKnown RBP10.69□□□□□ -0.7
NECAP1-201ENST00000339754 APTXQ7Z2E3 356 aaKnown RBP10.69□□□□□ -0.7
NECAP1-201ENST00000339754 MAP3K14Q99558 947 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 FPGT-TNNI3KV9GXZ4 949 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 GGCXP38435 758 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 PBX1P40424 430 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 USP14P54578 494 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 ELOA2Q8IYF1 753 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-201ENST00000339754 TRMT44Q8IYL2 757 aaKnown RBP10.69□□□□□ -0.7
NECAP1-201ENST00000339754 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 KBTBD3Q8NAB2 608 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 COG1Q8WTW3 980 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-201ENST00000339754 KCNH3Q9ULD8 1083 aa10.69□□□□□ -0.7
NECAP1-201ENST00000339754 MYO6Q9UM54 1294 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms