RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
LRP1-202ENST00000338962 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
LRP1-202ENST00000338962 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 A0A1B0GUL6 1792 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 ANTXR2P58335 489 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 FAM173BQ6P4H8 233 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 TXNRD3Q86VQ6 643 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 RAI14Q9P0K7 980 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 TDO2P48775 406 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 PRELPP51888 382 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 NAA16Q6N069 864 aaPredicted RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 ANGEL1Q9UNK9 670 aaKnown RBP12.98□□□□□ -0.33
LRP1-202ENST00000338962 SLC4A4Q9Y6R1 1079 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
LRP1-202ENST00000338962 ELP1O95163 1332 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 CYP7A1P22680 504 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 KLRK1P26718 216 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
LRP1-202ENST00000338962 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
LRP1-202ENST00000338962 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 B4E1Z4 1266 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 CPLX1O14810 134 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 SEMA3EO15041 775 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 LMNB1P20700 586 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 RASSF7Q02833 373 aa12.97□□□□□ -0.33
LRP1-202ENST00000338962 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
LRP1-202ENST00000338962 NEDD4P46934 1319 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 RESTQ13127 1097 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 AOC3Q16853 763 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 SPATA32Q96LK8 384 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 CNNM2Q9H8M5 875 aa12.96□□□□□ -0.33
LRP1-202ENST00000338962 GOLGA6L4A6NEF3 574 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 PRKAB2O43741 272 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 PPFIA3O75145 1194 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 HIBADHP31937 336 aaKnown RBP12.96□□□□□ -0.34
LRP1-202ENST00000338962 PODNQ7Z5L7 613 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 TMEM87BQ96K49 555 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 ZMYND15Q9H091 742 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 RBSNQ9H1K0 784 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.34
LRP1-202ENST00000338962 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
LRP1-202ENST00000338962 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
LRP1-202ENST00000338962 IL1R1P14778 569 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 FOSBP53539 338 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 CD209Q9NNX6 404 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
LRP1-202ENST00000338962 CFAP45Q9UL16 551 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
LRP1-202ENST00000338962 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 TDRD7Q8NHU6 1098 aaKnown RBP12.94□□□□□ -0.34
LRP1-202ENST00000338962 KRT23Q9C075 422 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 TSPY26PQ9H489 355 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 KDM4AO75164 1064 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 RAB11FIP4Q86YS3 637 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 LEO1Q8WVC0 666 aaPredicted RBP12.94□□□□□ -0.34
LRP1-202ENST00000338962 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
LRP1-202ENST00000338962 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
LRP1-202ENST00000338962 FZD9O00144 591 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
LRP1-202ENST00000338962 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
LRP1-202ENST00000338962 CCDC173Q0VFZ6 552 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
LRP1-202ENST00000338962 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 CACNA1SQ13698 1873 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 CDKL5O76039 1030 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
LRP1-202ENST00000338962 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
LRP1-202ENST00000338962 APOA5Q6Q788 366 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms