RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 ZFPM1Q8IX07 1006 aa15.18■□□□□ 0.02
PRIM1-201ENST00000338193 CNTNAP1P78357 1384 aa15.18■□□□□ 0.02
PRIM1-201ENST00000338193 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
PRIM1-201ENST00000338193 ADM5C9JUS6 153 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 FOXP2O15409 715 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 PRKAB2O43741 272 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 MBD4O95243 580 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 SLURP2P0DP57 97 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 GSTO1P78417 241 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 BMP2KLQ5H9B9 411 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 PRAMEF18Q5VWM3 479 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 MAP1SQ66K74 1059 aaPredicted RBP15.17■□□□□ 0.02
PRIM1-201ENST00000338193 USP40Q9NVE5 1235 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 FAM198AQ9UFP1 575 aa15.17■□□□□ 0.02
PRIM1-201ENST00000338193 TCP10L2B9ZVM9 353 aa15.16■□□□□ 0.02
PRIM1-201ENST00000338193 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
PRIM1-201ENST00000338193 PPP4CP60510 307 aa15.16■□□□□ 0.02
PRIM1-201ENST00000338193 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
PRIM1-201ENST00000338193 APPBP2Q92624 585 aa15.16■□□□□ 0.02
PRIM1-201ENST00000338193 GLIS2Q9BZE0 524 aaPredicted RBP15.16■□□□□ 0.02
PRIM1-201ENST00000338193 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.16■□□□□ 0.029e-7■■■■□ 19.4
PRIM1-201ENST00000338193 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
PRIM1-201ENST00000338193 PGAP2Q9UHJ9 254 aa15.16■□□□□ 0.02
PRIM1-201ENST00000338193 SIPA1L1O43166 1804 aa15.16■□□□□ 0.02
PRIM1-201ENST00000338193 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
PRIM1-201ENST00000338193 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
PRIM1-201ENST00000338193 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
PRIM1-201ENST00000338193 TRAF5O00463 557 aa15.15■□□□□ 0.02
PRIM1-201ENST00000338193 LDHCP07864 332 aa15.15■□□□□ 0.02
PRIM1-201ENST00000338193 CHMLP26374 656 aa15.15■□□□□ 0.02
PRIM1-201ENST00000338193 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
PRIM1-201ENST00000338193 TCP10Q12799 353 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 PICALMQ13492 652 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 VPS53Q5VIR6 699 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.01
PRIM1-201ENST00000338193 USP48Q86UV5 1035 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 PNMA8AQ86V59 439 aaPredicted RBP15.14■□□□□ 0.01
PRIM1-201ENST00000338193 LDHDQ86WU2 507 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 COLQQ9Y215 455 aaPredicted RBP15.14■□□□□ 0.01
PRIM1-201ENST00000338193 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
PRIM1-201ENST00000338193 GPAA1O43292 621 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 MMP14P50281 582 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 SH3BP5LQ7L8J4 393 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 SLF2Q8IX21 1173 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
PRIM1-201ENST00000338193 TMEM39BQ9GZU3 492 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 FZD1Q9UP38 647 aa15.13■□□□□ 0.01
PRIM1-201ENST00000338193 TTLL13PA6NNM8 815 aa15.12■□□□□ 0.01
PRIM1-201ENST00000338193 ZFYP08048 801 aaPredicted RBP15.12■□□□□ 0.01
PRIM1-201ENST00000338193 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
PRIM1-201ENST00000338193 EPB41L4AQ9HCS5 686 aaPredicted RBP15.12■□□□□ 0.01
PRIM1-201ENST00000338193 MYH1P12882 1939 aa15.12■□□□□ 0.01
PRIM1-201ENST00000338193 FLT1P17948 1338 aa15.12■□□□□ 0.01
PRIM1-201ENST00000338193 ITGBL1O95965 494 aaPredicted RBP15.11■□□□□ 0.01
PRIM1-201ENST00000338193 RASA3Q14644 834 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
PRIM1-201ENST00000338193 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 IDI2Q9BXS1 227 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
PRIM1-201ENST00000338193 SAP30BPQ9UHR5 308 aaKnown RBP15.11■□□□□ 0.01
PRIM1-201ENST00000338193 PITPNM2Q9BZ72 1349 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 CYP2D7A0A087X1C5 515 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 DDTLA6NHG4 134 aaPredicted RBP15.11■□□□□ 0.01
PRIM1-201ENST00000338193 GSG1L2A8MUP6 293 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 IGSF3O75054 1194 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 BAG3O95817 575 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 CYP2D6P10635 497 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 KRT26Q7Z3Y9 468 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 AIDAQ96BJ3 306 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 DCPSQ96C86 337 aaKnown RBP15.11■□□□□ 0.01
PRIM1-201ENST00000338193 DEFB129Q9H1M3 183 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
PRIM1-201ENST00000338193 MYO1BO43795 1136 aa15.1■□□□□ 0.01
PRIM1-201ENST00000338193 SEC24BO95487 1268 aa15.1■□□□□ 0.01
PRIM1-201ENST00000338193 MCMDC2Q4G0Z9 681 aa15.1■□□□□ 0.01
PRIM1-201ENST00000338193 NBPF12Q5TAG4 269 aaPredicted RBP15.1■□□□□ 0.01
PRIM1-201ENST00000338193 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
PRIM1-201ENST00000338193 NOL10Q9BSC4 688 aaKnown RBP15.1■□□□□ 0.01
PRIM1-201ENST00000338193 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
PRIM1-201ENST00000338193 ATRNL1Q5VV63 1379 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 PTH1RQ03431 593 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 CDCA5Q96FF9 252 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 ESYT1Q9BSJ8 1104 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 OSBPL5Q9H0X9 879 aaPredicted RBP15.09■□□□□ 0.01
PRIM1-201ENST00000338193 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
PRIM1-201ENST00000338193 PALD1Q9ULE6 856 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 LAMB1P07942 1786 aa15.09■□□□□ 0.01
PRIM1-201ENST00000338193 PAPPA2Q9BXP8 1791 aa15.08■□□□□ 0
PRIM1-201ENST00000338193 SGSM2O43147 1006 aa15.08■□□□□ 0
PRIM1-201ENST00000338193 CDC45O75419 566 aa15.08■□□□□ 0
PRIM1-201ENST00000338193 TOMM70O94826 608 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms