RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLF2Q8IX21 1173 aa18.08■□□□□ 0.49
NPHP3-201ENST00000337331 RASEFQ8IZ41 740 aa18.08■□□□□ 0.49
NPHP3-201ENST00000337331 MIGA1Q8NAN2 632 aa18.08■□□□□ 0.49
NPHP3-201ENST00000337331 MED4Q9NPJ6 270 aa18.08■□□□□ 0.49
NPHP3-201ENST00000337331 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.48
NPHP3-201ENST00000337331 GOLGA6BA6NDN3 693 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 ABCB6Q9NP58 842 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 ZNF446Q9NWS9 450 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 FAM169AQ9Y6X4 670 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 PHLPP2Q6ZVD8 1323 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 DONSONQ9NYP3 566 aa18.08■□□□□ 0.48
NPHP3-201ENST00000337331 TRIM6Q9C030 488 aaPredicted RBP18.07■□□□□ 0.48
NPHP3-201ENST00000337331 EXOC1Q9NV70 894 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 NDUFB9Q9Y6M9 179 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 MYL5Q02045 173 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 BAIAP2L1Q9UHR4 511 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 NAA15Q9BXJ9 866 aaKnown RBP18.07■□□□□ 0.48
NPHP3-201ENST00000337331 PSMA7O14818 248 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 CASP8Q14790 479 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 TNNI3KQ59H18 835 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 CAPS2Q9BXY5 557 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 FPGT-TNNI3KV9GXZ4 949 aa18.07■□□□□ 0.48
NPHP3-201ENST00000337331 JAK2O60674 1132 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 HOXB7P09629 217 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 NBPF6Q5VWK0 638 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 NBPF5PQ86XG9 351 aaPredicted RBP18.06■□□□□ 0.48
NPHP3-201ENST00000337331 FAM89AQ96GI7 184 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 NBPF4Q96M43 638 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
NPHP3-201ENST00000337331 ABCC4O15439 1325 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
NPHP3-201ENST00000337331 CYLC1P35663 651 aaPredicted RBP18.06■□□□□ 0.48
NPHP3-201ENST00000337331 CETN2P41208 172 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 PRPF4BQ13523 1007 aaKnown RBP18.06■□□□□ 0.48
NPHP3-201ENST00000337331 OTUD7BQ6GQQ9 843 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 BABAM1Q9NWV8 329 aa18.06■□□□□ 0.48
NPHP3-201ENST00000337331 MACROD2A1Z1Q3 448 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 EYA2O00167 538 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 BUB1BO60566 1050 aaPredicted RBP18.05■□□□□ 0.48
NPHP3-201ENST00000337331 TNIP1Q15025 636 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 AOX1Q06278 1338 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 TADA3O75528 432 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 LARGE1O95461 756 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 ATP1A2P50993 1020 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 MAGEB6Q8N7X4 407 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 GOPCQ9HD26 462 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 TSPY3P0CV98 308 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 TSPY8P0CW00 308 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 RBBP5Q15291 538 aaKnown RBP18.05■□□□□ 0.48
NPHP3-201ENST00000337331 HEATR3Q7Z4Q2 680 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 SRGAP1Q7Z6B7 1085 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 EHBP1Q8NDI1 1231 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 CUL5Q93034 780 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 NAPGQ99747 312 aaPredicted RBP18.05■□□□□ 0.48
NPHP3-201ENST00000337331 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 GSTTP1A0A1W2PQM5 241 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 SF3A3Q12874 501 aaKnown RBP eCLIP18.05■□□□□ 0.48
NPHP3-201ENST00000337331 NYAP1Q6ZVC0 841 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 SPAG5Q96R06 1193 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
NPHP3-201ENST00000337331 ARID4AP29374 1257 aaPredicted RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 CORO7P57737 925 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 ACTN3Q08043 901 aaPredicted RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 ZKSCAN3Q9BRR0 538 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 ASIC1P78348 528 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 E4F1Q66K89 784 aaPredicted RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 PNMA8AQ86V59 439 aaPredicted RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 ACSBG1Q96GR2 724 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 METTL22Q9BUU2 404 aaPredicted RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 LONRF3Q496Y0 759 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
NPHP3-201ENST00000337331 LRRN4CLQ8ND94 238 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
NPHP3-201ENST00000337331 GNAQP50148 359 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 CCZ1BP86790 482 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 CCZ1P86791 482 aaPredicted RBP18.03■□□□□ 0.48
NPHP3-201ENST00000337331 SND1Q7KZF4 910 aaKnown RBP eCLIP18.03■□□□□ 0.48
NPHP3-201ENST00000337331 NLRP3Q96P20 1036 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 ZCCHC11Q5TAX3 1644 aaKnown RBP18.03■□□□□ 0.48
NPHP3-201ENST00000337331 B4E1Z4 1266 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 TBC1D8O95759 1140 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 POTEJP0CG39 1038 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 IL2RBP14784 551 aa18.03■□□□□ 0.48
NPHP3-201ENST00000337331 HPDP32754 393 aaPredicted RBP18.03■□□□□ 0.48
NPHP3-201ENST00000337331 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
NPHP3-201ENST00000337331 EDC3Q96F86 508 aaKnown RBP18.02■□□□□ 0.48
NPHP3-201ENST00000337331 TBC1D31Q96DN5 1066 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 TTC37Q6PGP7 1564 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 CHUKO15111 745 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 ZMYND10O75800 440 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 CKAP4Q07065 602 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms