RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SARM1Q6SZW1 724 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 SSH3Q8TE77 659 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 UBLCP1Q8WVY7 318 aaPredicted RBP14.92□□□□□ -0.02
COL2A1-201ENST00000337299 JAKMIP2Q96AA8 810 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 WDR24Q96S15 920 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 PAG1Q9NWQ8 432 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 MAST1Q9Y2H9 1570 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
COL2A1-201ENST00000337299 UBA7P41226 1012 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 TIMM10P62072 90 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 CYP26C1Q6V0L0 522 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 RIPOR2Q9Y4F9 1068 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 NLRP5P59047 1200 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 BICDL1Q6ZP65 573 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 ACRBPQ8NEB7 543 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 EAF2Q96CJ1 260 aaPredicted RBP14.92□□□□□ -0.02
COL2A1-201ENST00000337299 FAM169AQ9Y6X4 670 aa14.92□□□□□ -0.02
COL2A1-201ENST00000337299 CCDC196A0A1B0GTZ2 297 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 FBXW10Q5XX13 1052 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 LMBR1LQ6UX01 489 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 TMTC1Q8IUR5 882 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 FMNL3Q8IVF7 1028 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 LRRN4CLQ8ND94 238 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 FHOD1Q9Y613 1164 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 SYNRGQ9UMZ2 1314 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 POSTNQ15063 836 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 WHAMMP3Q1A5X7 153 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 ANKS4BQ8N8V4 417 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 CXorf56Q9H5V9 222 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 SERTAD1Q9UHV2 236 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 RPAP1Q9BWH6 1393 aaPredicted RBP14.91□□□□□ -0.02
COL2A1-201ENST00000337299 ACTN3Q08043 901 aaPredicted RBP14.91□□□□□ -0.02
COL2A1-201ENST00000337299 TOGARAM2Q6ZUX3 1019 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 SUGCTQ9HAC7 445 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 POLD4Q9HCU8 107 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 LCMT1Q9UIC8 334 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 RCOR1Q9UKL0 485 aa14.91□□□□□ -0.02
COL2A1-201ENST00000337299 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
COL2A1-201ENST00000337299 RESTQ13127 1097 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 ZRSR2Q15696 482 aaKnown RBP14.9□□□□□ -0.02
COL2A1-201ENST00000337299 MLKLQ8NB16 471 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 GOLPH3LQ9H4A5 285 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 TRIM75PA6NK02 468 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 GSPT2Q8IYD1 628 aaKnown RBP14.9□□□□□ -0.02
COL2A1-201ENST00000337299 SMARCC2Q8TAQ2 1214 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 LRP2BPQ9P2M1 347 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 PPP1R7Q15435 360 aa14.9□□□□□ -0.02
COL2A1-201ENST00000337299 CASP14P31944 242 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 TUBB2AQ13885 445 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 NEDD9Q14511 834 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 KSR2Q6VAB6 950 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 ZNF589Q86UQ0 364 aaPredicted RBP14.89□□□□□ -0.03
COL2A1-201ENST00000337299 TUBB2BQ9BVA1 445 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 PPP1R12CQ9BZL4 782 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 GJB4Q9NTQ9 266 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 WWC3Q9ULE0 1092 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 TTC21AQ8NDW8 1320 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 KRT40Q6A162 431 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 NFATC2IPQ8NCF5 419 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 MAP4K1Q92918 833 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 PAIP2Q9BPZ3 127 aaKnown RBP14.89□□□□□ -0.03
COL2A1-201ENST00000337299 ZKSCAN3Q9BRR0 538 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 VWA3AA6NCI4 1184 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 CLTAP09496 248 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 GPTP24298 496 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 CCDC6Q16204 474 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 TTC14Q96N46 770 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 IL25Q9H293 177 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 C19orf44Q9H6X5 657 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 N4BP1O75113 896 aaKnown RBP14.89□□□□□ -0.03
COL2A1-201ENST00000337299 SPTY2D1Q68D10 685 aaPredicted RBP14.89□□□□□ -0.03
COL2A1-201ENST00000337299 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
COL2A1-201ENST00000337299 GIGYF2Q6Y7W6 1299 aaKnown RBP14.89□□□□□ -0.03
COL2A1-201ENST00000337299 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 XAGE3Q8WTP9 111 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 TRIM31Q9BZY9 425 aa14.89□□□□□ -0.03
COL2A1-201ENST00000337299 ABCC1P33527 1531 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 GSTTP1A0A1W2PQM5 241 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 ZNF622Q969S3 477 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL2A1-201ENST00000337299 FAM170AA1A519 330 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 STAT6P42226 847 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 IQCB1Q15051 598 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 PSMA7O14818 248 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 GUCY2CP25092 1073 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 KIF5BP33176 963 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 PCK1P35558 622 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 TBC1D8BQ0IIM8 1120 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 PDCLQ13371 301 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 CCDC40Q4G0X9 1142 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 AP1ARQ63HQ0 302 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 NYAP1Q6ZVC0 841 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 IFNL2Q8IZJ0 200 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 KCNJ14Q9UNX9 436 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 METP08581 1390 aa14.88□□□□□ -0.03
COL2A1-201ENST00000337299 HOXC9P31274 260 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms