RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 A0A1W2PQD8 194 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 SYKP43405 635 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 NUP133Q8WUM0 1156 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 L2HGDHQ9H9P8 463 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 ZNF446Q9NWS9 450 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.54
HIF1A-202ENST00000337138 ZAP70P43403 619 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 SYNE4Q8N205 404 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
HIF1A-202ENST00000337138 BMP6P22004 513 aa11.65□□□□□ -0.55
HIF1A-202ENST00000337138 KCNJ6P48051 423 aa11.65□□□□□ -0.55
HIF1A-202ENST00000337138 C19orf44Q9H6X5 657 aa11.65□□□□□ -0.55
HIF1A-202ENST00000337138 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.55
HIF1A-202ENST00000337138 KIAA1468Q9P260 1216 aa11.65□□□□□ -0.55
HIF1A-202ENST00000337138 DUOX1Q9NRD9 1551 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 UBE2Q2LH0YL09 131 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 PES1O00541 588 aaKnown RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 FGAP02671 866 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 E4F1Q66K89 784 aaPredicted RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 TOM1L2Q6ZVM7 507 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 UBXN6Q9BZV1 441 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 FOCADQ5VW36 1801 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 CAVIN2O95810 425 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 ARMCX5Q6P1M9 558 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 POLR3EQ9NVU0 708 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 TUBE1Q9UJT0 475 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 COBLO75128 1261 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 WDHD1O75717 1129 aaPredicted RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 PFKFB1P16118 471 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 FANCCQ00597 558 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 KARSQ15046 597 aaKnown RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
HIF1A-202ENST00000337138 INTS13Q9NVM9 706 aa11.64□□□□□ -0.55
HIF1A-202ENST00000337138 B4E1Z4 1266 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 TOP1P11387 765 aaKnown RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 CNNM3Q8NE01 707 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 SLC26A6Q9BXS9 759 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 CWC15Q9P013 229 aaKnown RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 IQSEC3Q9UPP2 1182 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 SLC9C2Q5TAH2 1124 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 CPLX2Q6PUV4 134 aaKnown RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 SLC4A9Q96Q91 983 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 PUS7LQ9H0K6 701 aaKnown RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 ZMYM6O95789 1325 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 SNAP23O00161 211 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 GNG11P61952 73 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 GABPB1Q06547 395 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 BMS1Q14692 1282 aaKnown RBP11.63□□□□□ -0.55
HIF1A-202ENST00000337138 MYSM1Q5VVJ2 828 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 ADALQ6DHV7 355 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 CARD6Q9BX69 1037 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
HIF1A-202ENST00000337138 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 SEC31AO94979 1220 aaKnown RBP11.62□□□□□ -0.55
HIF1A-202ENST00000337138 LMAN1P49257 510 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 GSDMDP57764 484 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 ANO1Q5XXA6 986 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 XAGE2Q96GT9 111 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 NEMFO60524 1076 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 STX17P56962 302 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 GPATCH11Q8N954 259 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 DPF2Q92785 391 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 DESI2Q9BSY9 194 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 MORC2Q9Y6X9 1032 aaPredicted RBP11.62□□□□□ -0.55
HIF1A-202ENST00000337138 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
HIF1A-202ENST00000337138 TMEM232C9JQI7 657 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 EYA2O00167 538 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 IL15P40933 162 aaPredicted RBP11.62□□□□□ -0.55
HIF1A-202ENST00000337138 ADKP55263 362 aaKnown RBP11.62□□□□□ -0.55
HIF1A-202ENST00000337138 TRIM65Q6PJ69 517 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 LDHAL6AQ6ZMR3 332 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 GRAMD1CQ8IYS0 662 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 NCOA7Q8NI08 942 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
HIF1A-202ENST00000337138 GPAA1O43292 621 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
HIF1A-202ENST00000337138 SENP2Q9HC62 589 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 FANCLQ9NW38 375 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 KCNJ14Q9UNX9 436 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 FOXN1O15353 648 aa11.61□□□□□ -0.55
HIF1A-202ENST00000337138 IRX3P78415 501 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms