RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 MIEF2Q96C03 454 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
SEC23B-202ENST00000336714 MMS19Q96T76 1030 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 HMG20BQ9P0W2 317 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 MYO6Q9UM54 1294 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 GPTP24298 496 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 HDGFP51858 240 aaKnown RBP12.56□□□□□ -0.4
SEC23B-202ENST00000336714 BPIFA3Q9BQP9 254 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 CRB1P82279 1406 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 ZNF185O15231 689 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
SEC23B-202ENST00000336714 DNA2P51530 1060 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
SEC23B-202ENST00000336714 IFT88Q13099 833 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
SEC23B-202ENST00000336714 SELENOOQ9BVL4 669 aa12.56□□□□□ -0.4
SEC23B-202ENST00000336714 ZCCHC11Q5TAX3 1644 aaKnown RBP12.55□□□□□ -0.4
SEC23B-202ENST00000336714 GOLGA8BA8MQT2 603 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 CDR1P51861 262 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 SLC7A5Q01650 507 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 CEP85LQ5SZL2 805 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
SEC23B-202ENST00000336714 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
SEC23B-202ENST00000336714 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 RUFY1Q96T51 708 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 COL15A1P39059 1388 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 A0A1W2PQ27 194 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 A0A1W2PQ64 194 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 A0A1W2PQD8 194 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 SEC24CP53992 1094 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 TBC1D31Q96DN5 1066 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 PIP4K2BP78356 416 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 C2orf54Q08AI8 447 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 SHC4Q6S5L8 630 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 STAMQ92783 540 aa12.55□□□□□ -0.4
SEC23B-202ENST00000336714 IRF6O14896 467 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 AFMP43652 599 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
SEC23B-202ENST00000336714 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 COG1Q8WTW3 980 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 NUP88Q99567 741 aaPredicted RBP12.54□□□□□ -0.4
SEC23B-202ENST00000336714 KLF18A0A0U1RQI7 1052 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 APBA1Q02410 837 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 PPARAQ07869 468 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
SEC23B-202ENST00000336714 GBP2P32456 591 aaPredicted RBP12.53□□□□□ -0.4
SEC23B-202ENST00000336714 FXR1P51114 621 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC23B-202ENST00000336714 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 UBE2Q2LH0YL09 131 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 GCKP35557 465 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 VPS16Q9H269 839 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 SMARCAL1Q9NZC9 954 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 AGPSO00116 658 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 EIF3HO15372 352 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC23B-202ENST00000336714 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 MYBL1P10243 752 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 CMA1P23946 247 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
SEC23B-202ENST00000336714 PHKBQ93100 1093 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 EEF2KMTQ96G04 330 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 SUCLG2Q96I99 432 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
SEC23B-202ENST00000336714 ZC3H13Q5T200 1668 aaKnown RBP12.52□□□□□ -0.4
SEC23B-202ENST00000336714 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.4
SEC23B-202ENST00000336714 ATP1A1P05023 1023 aaKnown RBP12.52□□□□□ -0.4
SEC23B-202ENST00000336714 GRIN1Q05586 938 aa12.52□□□□□ -0.4
SEC23B-202ENST00000336714 TBX2Q13207 712 aaPredicted RBP12.52□□□□□ -0.4
SEC23B-202ENST00000336714 SF3B2Q13435 895 aaKnown RBP12.52□□□□□ -0.4
SEC23B-202ENST00000336714 EYA1Q99502 592 aa12.52□□□□□ -0.4
SEC23B-202ENST00000336714 KLC4Q9NSK0 619 aa12.52□□□□□ -0.4
SEC23B-202ENST00000336714 KCNH3Q9ULD8 1083 aa12.52□□□□□ -0.4
SEC23B-202ENST00000336714 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.4
SEC23B-202ENST00000336714 ZFYVE16Q7Z3T8 1539 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
SEC23B-202ENST00000336714 HPDP32754 393 aaPredicted RBP12.52□□□□□ -0.41
SEC23B-202ENST00000336714 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.41
SEC23B-202ENST00000336714 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 PROSER3Q2NL68 480 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 ARMC3Q5W041 872 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
SEC23B-202ENST00000336714 ENO4A6NNW6 628 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 CHUKO15111 745 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 MYO1BO43795 1136 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 KRT14P02533 472 aa12.52□□□□□ -0.41
SEC23B-202ENST00000336714 C14orf37Q86TY3 774 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 502.5 ms