RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.55■□□□□ 0.88
IFFO1-201ENST00000336604 SLC12A7Q9Y666 1083 aa20.55■□□□□ 0.88
IFFO1-201ENST00000336604 V9GYY5 206 aaPredicted RBP20.55■□□□□ 0.88
IFFO1-201ENST00000336604 IFIT3O14879 490 aaKnown RBP20.54■□□□□ 0.88
IFFO1-201ENST00000336604 FGFR2P21802 821 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 TRIM29Q14134 588 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
IFFO1-201ENST00000336604 JMYQ8N9B5 988 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 TIGD1Q96MW7 591 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 TUBE1Q9UJT0 475 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 PATL2C9JE40 543 aaKnown RBP20.54■□□□□ 0.88
IFFO1-201ENST00000336604 ZBTB22O15209 634 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 FANCCQ00597 558 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 STK11IPQ8N1F8 1099 aa20.54■□□□□ 0.88
IFFO1-201ENST00000336604 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.54■□□□□ 0.88
IFFO1-201ENST00000336604 GUCY1A2P33402 732 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 PRKAB2O43741 272 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 RESP18Q5W5W9 173 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 CCDC150Q8NCX0 1101 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 ZKSCAN3Q9BRR0 538 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 KCND1Q9NSA2 647 aa20.53■□□□□ 0.88
IFFO1-201ENST00000336604 IKBKBO14920 756 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 RRP12Q5JTH9 1297 aaKnown RBP20.52■□□□□ 0.88
IFFO1-201ENST00000336604 METTL16Q86W50 562 aaKnown RBP20.52■□□□□ 0.88
IFFO1-201ENST00000336604 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 RGS22Q8NE09 1264 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 KIF18AQ8NI77 898 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 LIFRP42702 1097 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 ALX1Q15699 326 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 FOXP4Q8IVH2 680 aaPredicted RBP20.52■□□□□ 0.88
IFFO1-201ENST00000336604 DPF2Q92785 391 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 BCL9O00512 1426 aa20.52■□□□□ 0.88
IFFO1-201ENST00000336604 MAP3K12Q12852 859 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 PTPN21Q16825 1174 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 PPP1R13BQ96KQ4 1090 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 ABCA3Q99758 1704 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.51■□□□□ 0.87
IFFO1-201ENST00000336604 MROH5Q6ZUA9 1318 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 GSG1L2A8MUP6 293 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 BTBD18B2RXH4 712 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 SSRP1Q08945 709 aaKnown RBP20.51■□□□□ 0.87
IFFO1-201ENST00000336604 CMTR1Q8N1G2 835 aaKnown RBP20.51■□□□□ 0.87
IFFO1-201ENST00000336604 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.51■□□□□ 0.87
IFFO1-201ENST00000336604 KCNH3Q9ULD8 1083 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 LRP6O75581 1613 aa20.51■□□□□ 0.87
IFFO1-201ENST00000336604 FOXN1O15353 648 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 KCNJ14Q9UNX9 436 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 MYH3P11055 1940 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 SLC5A1P13866 664 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 MYL5Q02045 173 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 AKNAD1Q5T1N1 836 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 NOSTRINQ8IVI9 506 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 ZNF34Q8IZ26 560 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 CNNM3Q8NE01 707 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 DDX41Q9UJV9 622 aaKnown RBP20.5■□□□□ 0.87
IFFO1-201ENST00000336604 FAM237AA0A1B0GTK4 181 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 SERPINC1P01008 464 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 UBASH3AP57075 661 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 PCDHA5Q9Y5H7 936 aa20.5■□□□□ 0.87
IFFO1-201ENST00000336604 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 CUTAO60888 179 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 FMNL1O95466 1100 aaPredicted RBP20.49■□□□□ 0.87
IFFO1-201ENST00000336604 GRIN1Q05586 938 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 MPHOSPH8Q99549 860 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 ZNF335Q9H4Z2 1342 aaPredicted RBP20.49■□□□□ 0.87
IFFO1-201ENST00000336604 SLIT2O94813 1529 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 GTF2E1P29083 439 aaPredicted RBP20.49■□□□□ 0.87
IFFO1-201ENST00000336604 TDO2P48775 406 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 TOB1P50616 345 aaPredicted RBP20.49■□□□□ 0.87
IFFO1-201ENST00000336604 BCAMP50895 628 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 CFAP100Q494V2 611 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 KRBA2Q6ZNG9 492 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 MIGA1Q8NAN2 632 aa20.49■□□□□ 0.87
IFFO1-201ENST00000336604 ITGB4P16144 1822 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 IFNAR1P17181 557 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 BMP6P22004 513 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 HSP90AA4PQ58FG1 418 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 SUSD4Q5VX71 490 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 SYT10Q6XYQ8 523 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 DIS3L2Q8IYB7 885 aaKnown RBP20.48■□□□□ 0.87
IFFO1-201ENST00000336604 IL6STP40189 918 aaPredicted RBP20.48■□□□□ 0.87
IFFO1-201ENST00000336604 KRI1Q8N9T8 703 aaKnown RBP20.48■□□□□ 0.87
IFFO1-201ENST00000336604 CNNM2Q9H8M5 875 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 FANCLQ9NW38 375 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
IFFO1-201ENST00000336604 STK36Q9NRP7 1315 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 MMP1P03956 469 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 SLFN14P0C7P3 912 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 PDE4BQ07343 736 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 GOLGA8FQ08AF8 430 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 GOLGA8DPQ0D2H9 430 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 ELF2Q15723 593 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 KRT23Q9C075 422 aa20.47■□□□□ 0.87
IFFO1-201ENST00000336604 ECM29Q5VYK3 1845 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms