RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
LIPA-202ENST00000336233 WASF1Q92558 559 aa16.5■□□□□ 0.23
LIPA-202ENST00000336233 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
LIPA-202ENST00000336233 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.5■□□□□ 0.23
LIPA-202ENST00000336233 ZSWIM5Q9P217 1185 aa16.5■□□□□ 0.23
LIPA-202ENST00000336233 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 SIK1P57059 783 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
LIPA-202ENST00000336233 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 DPCR1Q3MIW9 517 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 PHKBQ93100 1093 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 SCN7AQ01118 1682 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 IFIT3O14879 490 aaKnown RBP16.49■□□□□ 0.23
LIPA-202ENST00000336233 CTDSPL2Q05D32 466 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 ITPK1Q13572 414 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 TRIM29Q14134 588 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 DDB1Q16531 1140 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.49■□□□□ 0.23
LIPA-202ENST00000336233 IMPACTQ9P2X3 320 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 TUBE1Q9UJT0 475 aa16.49■□□□□ 0.23
LIPA-202ENST00000336233 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 RXRAP19793 462 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
LIPA-202ENST00000336233 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 CDC5LQ99459 802 aaKnown RBP16.48■□□□□ 0.23
LIPA-202ENST00000336233 OSBPL5Q9H0X9 879 aaPredicted RBP16.48■□□□□ 0.23
LIPA-202ENST00000336233 COL4A1P02462 1669 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 A0A087WWV3 80 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 GSDMDP57764 484 aa16.48■□□□□ 0.23
LIPA-202ENST00000336233 ZRSR1Q15695 479 aaKnown RBP16.48■□□□□ 0.23
LIPA-202ENST00000336233 ELOA2Q8IYF1 753 aaPredicted RBP16.48■□□□□ 0.23
LIPA-202ENST00000336233 IKBKBO14920 756 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 CUTAO60888 179 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 BCAMP50895 628 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 ERCC4Q92889 916 aaPredicted RBP16.47■□□□□ 0.23
LIPA-202ENST00000336233 RNF41Q9H4P4 317 aaPredicted RBP16.47■□□□□ 0.23
LIPA-202ENST00000336233 CTIFO43310 598 aaKnown RBP16.47■□□□□ 0.23
LIPA-202ENST00000336233 CHRNDQ07001 517 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
LIPA-202ENST00000336233 SHC4Q6S5L8 630 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 INCENPQ9NQS7 918 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 ANAPC4Q9UJX5 808 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
LIPA-202ENST00000336233 SMTNL1A8MU46 457 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 SNAP23O00161 211 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 RIOK3O14730 519 aaKnown RBP16.46■□□□□ 0.23
LIPA-202ENST00000336233 RGL2O15211 777 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 SYKP43405 635 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
LIPA-202ENST00000336233 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.23
LIPA-202ENST00000336233 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
LIPA-202ENST00000336233 CACNA1SQ13698 1873 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 PRKAB2O43741 272 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 TDO2P48775 406 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 CCZ1BP86790 482 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 CCZ1P86791 482 aaPredicted RBP16.46■□□□□ 0.23
LIPA-202ENST00000336233 GNL2Q13823 731 aaKnown RBP16.46■□□□□ 0.23
LIPA-202ENST00000336233 NCAPHQ15003 741 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 ZNF710Q8N1W2 664 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
LIPA-202ENST00000336233 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.22
LIPA-202ENST00000336233 MARCKSP29966 332 aaPredicted RBP16.45■□□□□ 0.22
LIPA-202ENST00000336233 TPM4P67936 248 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 MMP1P03956 469 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 WTAPQ15007 396 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 RTN1Q16799 776 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 NOSTRINQ8IVI9 506 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
LIPA-202ENST00000336233 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
LIPA-202ENST00000336233 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
LIPA-202ENST00000336233 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
LIPA-202ENST00000336233 FOXP1Q9H334 677 aaPredicted RBP16.44■□□□□ 0.22
LIPA-202ENST00000336233 PAXBP1Q9Y5B6 917 aa16.44■□□□□ 0.22
LIPA-202ENST00000336233 MORC2Q9Y6X9 1032 aaPredicted RBP16.44■□□□□ 0.22
LIPA-202ENST00000336233 DUOX1Q9NRD9 1551 aa16.44■□□□□ 0.22
LIPA-202ENST00000336233 COL1A1P02452 1464 aaPredicted RBP16.44■□□□□ 0.22
LIPA-202ENST00000336233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
LIPA-202ENST00000336233 SYCP1Q15431 976 aa16.44■□□□□ 0.22
LIPA-202ENST00000336233 TRIM22Q8IYM9 498 aa16.44■□□□□ 0.22
LIPA-202ENST00000336233 ZHX1Q9UKY1 873 aaPredicted RBP16.44■□□□□ 0.22
LIPA-202ENST00000336233 MYO1BO43795 1136 aa16.43■□□□□ 0.22
LIPA-202ENST00000336233 PPARAQ07869 468 aa16.43■□□□□ 0.22
LIPA-202ENST00000336233 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
LIPA-202ENST00000336233 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
LIPA-202ENST00000336233 LRP2BPQ9P2M1 347 aa16.43■□□□□ 0.22
LIPA-202ENST00000336233 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
LIPA-202ENST00000336233 DEXIO95424 95 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms