RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 XPO4Q9C0E2 1151 aaKnown RBP17.19■□□□□ 0.34
UBA1-201ENST00000335972 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 NR5A1Q13285 461 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
UBA1-201ENST00000335972 TMC6Q7Z403 805 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 PDILTQ8N807 584 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.18■□□□□ 0.341e-8■■■□□ 16
UBA1-201ENST00000335972 V9GYY5 206 aaPredicted RBP17.18■□□□□ 0.34
UBA1-201ENST00000335972 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
UBA1-201ENST00000335972 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 PRDM10Q9NQV6 1147 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 STRCQ7RTU9 1775 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 MYH15Q9Y2K3 1946 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 NUP98P52948 1817 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 SLC39A14Q15043 492 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
UBA1-201ENST00000335972 SSRP1Q08945 709 aaKnown RBP17.17■□□□□ 0.34
UBA1-201ENST00000335972 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.17■□□□□ 0.34
UBA1-201ENST00000335972 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 GRAMD1CQ8IYS0 662 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.17■□□□□ 0.34
UBA1-201ENST00000335972 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 BAZ2BQ9UIF8 2168 aaKnown RBP17.17■□□□□ 0.34
UBA1-201ENST00000335972 MYH7P12883 1935 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 FAM205CA6NFA0 338 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 ERFEQ4G0M1 354 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 PKNOX2Q96KN3 472 aa17.17■□□□□ 0.34
UBA1-201ENST00000335972 NAT10Q9H0A0 1025 aaKnown RBP17.17■□□□□ 0.34
UBA1-201ENST00000335972 KLRK1P26718 216 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 LONRF3Q496Y0 759 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 LRP6O75581 1613 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 CDKL5O76039 1030 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 CMA1P23946 247 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 WTAPQ15007 396 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 FAM182BQ5T319 152 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 MRFAP1L1Q96HT8 127 aa17.16■□□□□ 0.34
UBA1-201ENST00000335972 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
UBA1-201ENST00000335972 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
UBA1-201ENST00000335972 PTPAQ15257 358 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 TMEM87BQ96K49 555 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 RTN1Q16799 776 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 SARM1Q6SZW1 724 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
UBA1-201ENST00000335972 COL4A1P02462 1669 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 NTSR2O95665 410 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 DPF2Q92785 391 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
UBA1-201ENST00000335972 NPHP1O15259 732 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 CAVIN2O95810 425 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 GLIPR1L2Q4G1C9 344 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 MAP3K14Q99558 947 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 CCZ1BP86790 482 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 CCZ1P86791 482 aaPredicted RBP17.14■□□□□ 0.33
UBA1-201ENST00000335972 USP49Q70CQ1 688 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 FOXP4Q8IVH2 680 aaPredicted RBP17.14■□□□□ 0.33
UBA1-201ENST00000335972 NLRP12P59046 1061 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 NACAP1Q9BZK3 213 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 TFCP2L1Q9NZI6 479 aa17.14■□□□□ 0.33
UBA1-201ENST00000335972 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 TOB1P50616 345 aaPredicted RBP17.13■□□□□ 0.33
UBA1-201ENST00000335972 TAF1P21675 1872 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 CBX1P83916 185 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 PPARAQ07869 468 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 NCAPHQ15003 741 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 VPS54Q9P1Q0 977 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 MYH3P11055 1940 aa17.13■□□□□ 0.33
UBA1-201ENST00000335972 GOLGB1Q14789 3259 aaKnown RBP17.13■□□□□ 0.33
UBA1-201ENST00000335972 ERICH2A1L162 156 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
UBA1-201ENST00000335972 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
UBA1-201ENST00000335972 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
UBA1-201ENST00000335972 SGMS1Q86VZ5 419 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 CABP5Q9NP86 173 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 KCNH3Q9ULD8 1083 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 WDR19Q8NEZ3 1342 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 NMT2O60551 498 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 CASP1P29466 404 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 CDC25BP30305 580 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 PDE4BQ07343 736 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms