RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
LIMK2-202ENST00000333611 CAVIN2O95810 425 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 OTUD6BQ8N6M0 293 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
LIMK2-202ENST00000333611 SETD1AO15047 1707 aaKnown RBP13.51□□□□□ -0.25
LIMK2-202ENST00000333611 A0A0G2JS52 829 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 EIF4E1BA6NMX2 242 aaKnown RBP13.5□□□□□ -0.25
LIMK2-202ENST00000333611 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
LIMK2-202ENST00000333611 PDIA6Q15084 440 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
LIMK2-202ENST00000333611 BCAS4Q8TDM0 211 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 KAT2BQ92831 832 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 FAM169AQ9Y6X4 670 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 PRC1O43663 620 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
LIMK2-202ENST00000333611 NAA16Q6N069 864 aaPredicted RBP13.5□□□□□ -0.25
LIMK2-202ENST00000333611 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 PUS3Q9BZE2 481 aaKnown RBP13.5□□□□□ -0.25
LIMK2-202ENST00000333611 PXDNQ92626 1479 aa13.5□□□□□ -0.25
LIMK2-202ENST00000333611 ZSCAN12O43309 604 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 ZNF202O95125 648 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 EIF5P55010 431 aaKnown RBP13.49□□□□□ -0.25
LIMK2-202ENST00000333611 TTC39AQ5SRH9 613 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 HAUS7Q99871 368 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 CRACR2AQ9BSW2 395 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 EHD4Q9H223 541 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 MED4Q9NPJ6 270 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
LIMK2-202ENST00000333611 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
LIMK2-202ENST00000333611 CCP110O43303 1012 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 RNF40O75150 1001 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 NAP1L1P55209 391 aaKnown RBP13.49□□□□□ -0.25
LIMK2-202ENST00000333611 TATP17735 454 aaPredicted RBP13.49□□□□□ -0.25
LIMK2-202ENST00000333611 UBASH3AP57075 661 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 CABP4P57796 275 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
LIMK2-202ENST00000333611 M0R2C6 588 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 PPFIA4O75335 1185 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 ARID4AP29374 1257 aaPredicted RBP13.48□□□□□ -0.25
LIMK2-202ENST00000333611 LONRF3Q496Y0 759 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 PHKBQ93100 1093 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 COPRSQ9NQ92 184 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 FANCCQ00597 558 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 MAST3O60307 1309 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
LIMK2-202ENST00000333611 PNOCQ13519 176 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
LIMK2-202ENST00000333611 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 SMARCC2Q8TAQ2 1214 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 CLIC6Q96NY7 704 aa13.48□□□□□ -0.25
LIMK2-202ENST00000333611 KIF4AO95239 1232 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 CDC25BP30305 580 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 ELF1P32519 619 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 SYKP43405 635 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 USPL1Q5W0Q7 1092 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 TTLL7Q6ZT98 887 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 LLPHQ9BRT6 129 aaKnown RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 CEP126Q9P2H0 1117 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 ENO4A6NNW6 628 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 PPP1R12AO14974 1030 aaPredicted RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 PFKFB1P16118 471 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 TXLNAP40222 546 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 TRDNQ13061 729 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 FMR1NBQ8N0W7 255 aaPredicted RBP13.47□□□□□ -0.25
LIMK2-202ENST00000333611 DENND2AQ9ULE3 1009 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 ADORA1P30542 326 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 NEDD9Q14511 834 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 ADALQ6DHV7 355 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 LINC00301Q8NCQ3 95 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 ENGASEQ8NFI3 743 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 DPF2Q92785 391 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 OSBP2Q969R2 916 aa13.47□□□□□ -0.25
LIMK2-202ENST00000333611 DIP2AQ14689 1571 aa13.46□□□□□ -0.25
LIMK2-202ENST00000333611 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
LIMK2-202ENST00000333611 IDH1O75874 414 aaKnown RBP13.46□□□□□ -0.25
LIMK2-202ENST00000333611 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.25
LIMK2-202ENST00000333611 CASP8Q14790 479 aa13.46□□□□□ -0.25
LIMK2-202ENST00000333611 MYSM1Q5VVJ2 828 aa13.46□□□□□ -0.25
LIMK2-202ENST00000333611 SLC52A2Q9HAB3 445 aa13.46□□□□□ -0.25
LIMK2-202ENST00000333611 G3BP2Q9UN86 482 aaKnown RBP13.46□□□□□ -0.25
LIMK2-202ENST00000333611 PARP3Q9Y6F1 533 aa13.46□□□□□ -0.25
LIMK2-202ENST00000333611 NDUFAB1O14561 156 aa13.46□□□□□ -0.26
LIMK2-202ENST00000333611 A1BGP04217 495 aa13.46□□□□□ -0.26
LIMK2-202ENST00000333611 ZNF827Q17R98 1081 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms