RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 SLU7O95391 586 aaKnown RBP14.22□□□□□ -0.13
VPS33B-201ENST00000333371 PDE6AP16499 860 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 PDE4BQ07343 736 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 NTRK3Q16288 839 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 NLRP10Q86W26 655 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 SLC26A6Q9BXS9 759 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 HPSEQ9Y251 543 aa14.22□□□□□ -0.13
VPS33B-201ENST00000333371 CHD4Q14839 1912 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 GOLGA8AA7E2F4 631 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 FANCGO15287 622 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 ZBTB43O43298 467 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 SERPINC1P01008 464 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 BMP6P22004 513 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 UBASH3AP57075 661 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 CFAP100Q494V2 611 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.13
VPS33B-201ENST00000333371 CCDC150Q8NCX0 1101 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 PLA2G12BQ9BX93 195 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 KCNJ14Q9UNX9 436 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 TBC1D2BQ9UPU7 963 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.13
VPS33B-201ENST00000333371 IARSP41252 1262 aaKnown RBP14.21□□□□□ -0.14
VPS33B-201ENST00000333371 PIP4K2BP78356 416 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 VGLL2Q8N8G2 317 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 ZNF397Q8NF99 534 aaPredicted RBP14.21□□□□□ -0.14
VPS33B-201ENST00000333371 ERO1AQ96HE7 468 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 GTPBP4Q9BZE4 634 aaKnown RBP14.21□□□□□ -0.14
VPS33B-201ENST00000333371 LY9Q9HBG7 655 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.14
VPS33B-201ENST00000333371 TRMT112Q9UI30 125 aaKnown RBP14.21□□□□□ -0.14
VPS33B-201ENST00000333371 FBXO3Q9UK99 471 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 THRAP3Q9Y2W1 955 aaKnown RBP14.21□□□□□ -0.14
VPS33B-201ENST00000333371 MYH3P11055 1940 aa14.21□□□□□ -0.14
VPS33B-201ENST00000333371 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 RRP12Q5JTH9 1297 aaKnown RBP14.2□□□□□ -0.14
VPS33B-201ENST00000333371 HOMER1Q86YM7 354 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 FAM177A1Q8N128 213 aaPredicted RBP14.2□□□□□ -0.14
VPS33B-201ENST00000333371 TMX1Q9H3N1 280 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 ZSWIM5Q9P217 1185 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 TUBE1Q9UJT0 475 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 PCDHA5Q9Y5H7 936 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 ANKRD36CQ5JPF3 1778 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 NUP98P52948 1817 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
VPS33B-201ENST00000333371 PRKAB2O43741 272 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 CTSWP56202 376 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 TPM4P67936 248 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 GRAMD1CQ8IYS0 662 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS33B-201ENST00000333371 ARMT1Q9H993 441 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 ZNF446Q9NWS9 450 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 CDHR2Q9BYE9 1310 aa14.2□□□□□ -0.14
VPS33B-201ENST00000333371 ANKRD18BA2A2Z9 1011 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 IL6STP40189 918 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-201ENST00000333371 RESP18Q5W5W9 173 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 AIDAQ96BJ3 306 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 STRBPQ96SI9 672 aaKnown RBP14.19□□□□□ -0.14
VPS33B-201ENST00000333371 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
VPS33B-201ENST00000333371 KCND1Q9NSA2 647 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 DNAI1Q9UI46 699 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 TCRBV5S4A2TA0A5A2 114 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 MBD4O95243 580 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 MYL5Q02045 173 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 MAGEB6Q8N7X4 407 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 TOMM22Q9NS69 142 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 INTS13Q9NVM9 706 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 BAZ2BQ9UIF8 2168 aaKnown RBP14.19□□□□□ -0.14
VPS33B-201ENST00000333371 LTBP4Q8N2S1 1624 aa14.19□□□□□ -0.14
VPS33B-201ENST00000333371 SMIM22K7EJ46 135 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 IFIT3O14879 490 aaKnown RBP14.18□□□□□ -0.14
VPS33B-201ENST00000333371 IKBKBO14920 756 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 PDE8BO95263 885 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 PODXL2Q9NZ53 605 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 KCNH3Q9ULD8 1083 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-201ENST00000333371 PPP6R2O75170 966 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 TOB1P50616 345 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-201ENST00000333371 KRBA2Q6ZNG9 492 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
VPS33B-201ENST00000333371 PDILTQ8N807 584 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 WDR19Q8NEZ3 1342 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
VPS33B-201ENST00000333371 ERVV-1B6SEH8 477 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 ATP6V1AP38606 617 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 TRIM29Q14134 588 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 L2HGDHQ9H9P8 463 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms