RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CAMSAP1Q5T5Y3 1602 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 ABCA9Q8IUA7 1624 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 FGAP02671 866 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 PKD2L1Q9P0L9 805 aa14.75□□□□□ -0.05
VSTM4-202ENST00000332853 ANTXR1Q9H6X2 564 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 AXIN2Q9Y2T1 843 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 ZNF202O95125 648 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 CHRNDQ07001 517 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 STXBP4Q6ZWJ1 553 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 PAF1Q8N7H5 531 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 COPRSQ9NQ92 184 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 M0R2C6 588 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 PDE6AP16499 860 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 RPS8P62241 208 aaKnown RBP14.74□□□□□ -0.05
VSTM4-202ENST00000332853 CETN1Q12798 172 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 AKNAD1Q5T1N1 836 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 IFNL3Q8IZI9 196 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 WDR66Q8TBY9 1149 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 LZTFL1Q9NQ48 299 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 ECM2O94769 699 aaPredicted RBP14.74□□□□□ -0.05
VSTM4-202ENST00000332853 RRAGDQ9NQL2 400 aaPredicted RBP14.74□□□□□ -0.05
VSTM4-202ENST00000332853 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 SIK1P57059 783 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 ZNF445P59923 1031 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 CCDC113Q9H0I3 377 aa14.74□□□□□ -0.05
VSTM4-202ENST00000332853 PUF60Q9UHX1 559 aaKnown RBP14.74□□□□□ -0.05
VSTM4-202ENST00000332853 ZYXQ15942 572 aaKnown RBP14.73□□□□□ -0.05
VSTM4-202ENST00000332853 ADCY9O60503 1353 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 MYL5Q02045 173 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 MSL1Q68DK7 614 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 DPP8Q6V1X1 898 aaPredicted RBP14.73□□□□□ -0.05
VSTM4-202ENST00000332853 GPT2Q8TD30 523 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 BCCIPQ9P287 314 aaKnown RBP eCLIP14.73□□□□□ -0.05
VSTM4-202ENST00000332853 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 ANKRD62A6NC57 917 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 DYNC1I1O14576 645 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.73□□□□□ -0.05
VSTM4-202ENST00000332853 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
VSTM4-202ENST00000332853 MAP9Q49MG5 647 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 OSBPL3Q9H4L5 887 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 USP17L12C9JPN9 530 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 USP17L21D6R901 530 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 TFAP4Q01664 338 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 SPAG1Q07617 926 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 PI16Q6UXB8 463 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 STAMQ92783 540 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 SPAG5Q96R06 1193 aa14.73□□□□□ -0.05
VSTM4-202ENST00000332853 SEC31BQ9NQW1 1179 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 MTMR6Q9Y217 621 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 TULP4Q9NRJ4 1543 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
VSTM4-202ENST00000332853 TTC38Q5R3I4 469 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 ANKARQ7Z5J8 1434 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 SYT10Q6XYQ8 523 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 HLTFQ14527 1009 aaKnown RBP eCLIP14.72□□□□□ -0.05
VSTM4-202ENST00000332853 NR1I2O75469 434 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 TXKP42681 527 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 SP4Q02446 784 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 SCRN1Q12765 414 aa14.72□□□□□ -0.05
VSTM4-202ENST00000332853 ZNF335Q9H4Z2 1342 aaPredicted RBP14.71□□□□□ -0.05
VSTM4-202ENST00000332853 CYLC1P35663 651 aaPredicted RBP14.71□□□□□ -0.05
VSTM4-202ENST00000332853 RGS12O14924 1447 aa14.71□□□□□ -0.05
VSTM4-202ENST00000332853 VPS16Q9H269 839 aa14.71□□□□□ -0.05
VSTM4-202ENST00000332853 LRRC7Q96NW7 1537 aa14.71□□□□□ -0.05
VSTM4-202ENST00000332853 FCHSD1Q86WN1 690 aa14.71□□□□□ -0.05
VSTM4-202ENST00000332853 MAP4K1Q92918 833 aa14.71□□□□□ -0.05
VSTM4-202ENST00000332853 CUTAO60888 179 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 KIAA0754O94854 1291 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 CCDC175P0C221 793 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 JDP2Q8WYK2 163 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 CHMP2AO43633 222 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 GTF2IP78347 998 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 PNOCQ13519 176 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 ZNF654Q8IZM8 581 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 GJA3Q9Y6H8 435 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 SASH1O94885 1247 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 PDE8BO95263 885 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 FAM13AO94988 1023 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
VSTM4-202ENST00000332853 USP28Q96RU2 1077 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 ERBB4Q15303 1308 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 PFKFB2O60825 505 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 ERCC3P19447 782 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 PTPN12Q05209 780 aaKnown RBP14.7□□□□□ -0.06
VSTM4-202ENST00000332853 CAPZA3Q96KX2 299 aa14.7□□□□□ -0.06
VSTM4-202ENST00000332853 APBA3O96018 575 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 PIGBQ92521 554 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
VSTM4-202ENST00000332853 GIGYF2Q6Y7W6 1299 aaKnown RBP14.69□□□□□ -0.06
VSTM4-202ENST00000332853 SV2BQ7L1I2 683 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 BLZF1Q9H2G9 400 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 PDE4DQ08499 809 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 CCDC174Q6PII3 467 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 HEG1Q9ULI3 1381 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 CYP21A2P08686 494 aa14.69□□□□□ -0.06
VSTM4-202ENST00000332853 IFFO1Q0D2I5 559 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms