RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 JMYQ8N9B5 988 aa27.71■■■□□ 2.03
SOX1-201ENST00000330949 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.71■■■□□ 2.03
SOX1-201ENST00000330949 AKR1B15C9JRZ8 316 aaPredicted RBP27.71■■■□□ 2.03
SOX1-201ENST00000330949 PRPF6O94906 941 aaKnown RBP27.71■■■□□ 2.03
SOX1-201ENST00000330949 RAI14Q9P0K7 980 aa27.71■■■□□ 2.03
SOX1-201ENST00000330949 SOWAHDA6NJG2 315 aa27.7■■■□□ 2.03
SOX1-201ENST00000330949 GRM8O00222 908 aa27.7■■■□□ 2.03
SOX1-201ENST00000330949 GCP02774 474 aa27.7■■■□□ 2.03
SOX1-201ENST00000330949 BANK1Q8NDB2 785 aa27.7■■■□□ 2.03
SOX1-201ENST00000330949 SMARCC1Q92922 1105 aaPredicted RBP27.7■■■□□ 2.03
SOX1-201ENST00000330949 FER1L4A9Z1Z3 1794 aa27.7■■■□□ 2.03
SOX1-201ENST00000330949 MRC1P22897 1456 aa27.7■■■□□ 2.02
SOX1-201ENST00000330949 LTN1O94822 1766 aa27.7■■■□□ 2.02
SOX1-201ENST00000330949 EXOC5O00471 708 aa27.7■■■□□ 2.02
SOX1-201ENST00000330949 SYF2O95926 243 aaKnown RBP27.7■■■□□ 2.02
SOX1-201ENST00000330949 ANKRD24Q8TF21 1146 aa27.7■■■□□ 2.02
SOX1-201ENST00000330949 KSR2Q6VAB6 950 aa27.69■■■□□ 2.02
SOX1-201ENST00000330949 ZNF18P17022 549 aa27.69■■■□□ 2.02
SOX1-201ENST00000330949 MARCKSP29966 332 aaPredicted RBP27.69■■■□□ 2.02
SOX1-201ENST00000330949 MAP9Q49MG5 647 aa27.69■■■□□ 2.02
SOX1-201ENST00000330949 EBAG9O00559 213 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 MCM3P25205 808 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 SHOX2O60902 331 aaPredicted RBP27.68■■■□□ 2.02
SOX1-201ENST00000330949 KAT2BQ92831 832 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 KAZALD1Q96I82 304 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 NFE2L3Q9Y4A8 694 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 PXDNQ92626 1479 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 SH3TC1Q8TE82 1336 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 FAM237AA0A1B0GTK4 181 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 CHGBP05060 677 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 LIG3P49916 1009 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 HSP90AA4PQ58FG1 418 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 CCDC102BQ68D86 513 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 RIC3Q7Z5B4 369 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 NAPGQ99747 312 aaPredicted RBP27.68■■■□□ 2.02
SOX1-201ENST00000330949 DSCC1Q9BVC3 393 aa27.68■■■□□ 2.02
SOX1-201ENST00000330949 E7EWF7 191 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 PPP6R2O75170 966 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 HNRNPH1P31943 449 aaKnown RBP27.67■■■□□ 2.02
SOX1-201ENST00000330949 POTEDQ86YR6 584 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 UTYO14607 1347 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 METTL16Q86W50 562 aaKnown RBP27.67■■■□□ 2.02
SOX1-201ENST00000330949 ANKLE2Q86XL3 938 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 DACH1Q9UI36 760 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 PCDHA5Q9Y5H7 936 aa27.67■■■□□ 2.02
SOX1-201ENST00000330949 RAD9BQ6WBX8 426 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 RASGRP2Q7LDG7 609 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 NUTM2AQ8IVF1 878 aaPredicted RBP27.66■■■□□ 2.02
SOX1-201ENST00000330949 CCDC148Q8NFR7 591 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 KIF23Q02241 960 aaPredicted RBP27.66■■■□□ 2.02
SOX1-201ENST00000330949 PDE4BQ07343 736 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 FBXL16Q8N461 479 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 IGSF22Q8N9C0 903 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 LINS1Q8NG48 757 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 TTF2Q9UNY4 1162 aaKnown RBP27.66■■■□□ 2.02
SOX1-201ENST00000330949 CDHR2Q9BYE9 1310 aa27.66■■■□□ 2.02
SOX1-201ENST00000330949 PRR29P0C7W0 189 aa27.65■■■□□ 2.02
SOX1-201ENST00000330949 SHC4Q6S5L8 630 aa27.65■■■□□ 2.02
SOX1-201ENST00000330949 SLC35F6Q8N357 371 aa27.65■■■□□ 2.02
SOX1-201ENST00000330949 ENOX1Q8TC92 643 aaKnown RBP27.65■■■□□ 2.02
SOX1-201ENST00000330949 HOOK1Q9UJC3 728 aaKnown RBP27.65■■■□□ 2.02
SOX1-201ENST00000330949 FAM169AQ9Y6X4 670 aa27.65■■■□□ 2.02
SOX1-201ENST00000330949 DBNLQ9UJU6 430 aaKnown RBP27.65■■■□□ 2.02
SOX1-201ENST00000330949 MYO1AQ9UBC5 1043 aa27.64■■■□□ 2.02
SOX1-201ENST00000330949 KIF28PB7ZC32 967 aa27.64■■■□□ 2.02
SOX1-201ENST00000330949 MYCNP04198 464 aaPredicted RBP27.64■■■□□ 2.02
SOX1-201ENST00000330949 NR1I3Q14994 352 aa27.64■■■□□ 2.02
SOX1-201ENST00000330949 PPFIBP1Q86W92 1011 aa27.64■■■□□ 2.02
SOX1-201ENST00000330949 CDC27P30260 824 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 SKIDA1Q1XH10 827 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 RESP18Q5W5W9 173 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 HPCAL4Q9UM19 191 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 NFAT5O94916 1531 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 CCT5P48643 541 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 SETQ01105 290 aaPredicted RBP27.63■■■□□ 2.01
SOX1-201ENST00000330949 NOA1Q8NC60 698 aaKnown RBP27.63■■■□□ 2.01
SOX1-201ENST00000330949 KCNH5Q8NCM2 988 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 KDM3BQ7LBC6 1761 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 BMP6P22004 513 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 FOXP4Q8IVH2 680 aaPredicted RBP27.63■■■□□ 2.01
SOX1-201ENST00000330949 MLKLQ8NB16 471 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 SUFUQ9UMX1 484 aa27.63■■■□□ 2.01
SOX1-201ENST00000330949 ELOA2Q8IYF1 753 aaPredicted RBP27.62■■■□□ 2.01
SOX1-201ENST00000330949 CLIC6Q96NY7 704 aa27.62■■■□□ 2.01
SOX1-201ENST00000330949 TACO1Q9BSH4 297 aaKnown RBP27.62■■■□□ 2.01
SOX1-201ENST00000330949 CHST3Q7LGC8 479 aa27.62■■■□□ 2.01
SOX1-201ENST00000330949 FAM76AQ8TAV0 307 aa27.62■■■□□ 2.01
SOX1-201ENST00000330949 HAUS7Q99871 368 aa27.62■■■□□ 2.01
SOX1-201ENST00000330949 DDX17Q92841 729 aaKnown RBP27.61■■■□□ 2.01
SOX1-201ENST00000330949 A0A1B0GTH6 734 aa27.61■■■□□ 2.01
SOX1-201ENST00000330949 LONRF3Q496Y0 759 aa27.61■■■□□ 2.01
SOX1-201ENST00000330949 KCNV1Q6PIU1 500 aa27.61■■■□□ 2.01
SOX1-201ENST00000330949 HELLSQ9NRZ9 838 aa27.61■■■□□ 2.01
SOX1-201ENST00000330949 A0A0U1RQJ8 604 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 STIM1Q13586 685 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 EPHA10Q5JZY3 1008 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 KBTBD3Q8NAB2 608 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 COG1Q8WTW3 980 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 ATRIPQ8WXE1 791 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 MYD88Q99836 296 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms