RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 BTBD19C9JJ37 291 aa22.27■■□□□ 1.16
RAB28-202ENST00000330852 TLR2O60603 784 aa22.27■■□□□ 1.16
RAB28-202ENST00000330852 ZFPM1Q8IX07 1006 aa22.27■■□□□ 1.16
RAB28-202ENST00000330852 NSUN4Q96CB9 384 aaKnown RBP22.27■■□□□ 1.16
RAB28-202ENST00000330852 ATRNL1Q5VV63 1379 aa22.27■■□□□ 1.16
RAB28-202ENST00000330852 SURF6O75683 361 aaKnown RBP22.26■■□□□ 1.15
RAB28-202ENST00000330852 MS4A1P11836 297 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 TNNI3KQ59H18 835 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 ZSCAN29Q8IWY8 852 aaPredicted RBP22.26■■□□□ 1.15
RAB28-202ENST00000330852 FPGT-TNNI3KV9GXZ4 949 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 CXCL11O14625 94 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 MCAMP43121 646 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 ANKRD23Q86SG2 305 aa22.26■■□□□ 1.15
RAB28-202ENST00000330852 ZNF512BQ96KM6 892 aaPredicted RBP22.26■■□□□ 1.15
RAB28-202ENST00000330852 PHF20L1A8MW92 1017 aa22.25■■□□□ 1.15
RAB28-202ENST00000330852 RLBP1P12271 317 aa22.25■■□□□ 1.15
RAB28-202ENST00000330852 RHBDL3P58872 404 aa22.25■■□□□ 1.15
RAB28-202ENST00000330852 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.25■■□□□ 1.15
RAB28-202ENST00000330852 ZNF384Q8TF68 577 aa22.25■■□□□ 1.15
RAB28-202ENST00000330852 RAI14Q9P0K7 980 aa22.25■■□□□ 1.15
RAB28-202ENST00000330852 LRP2BPQ9P2M1 347 aa22.25■■□□□ 1.15
RAB28-202ENST00000330852 TBC1D12O60347 775 aa22.24■■□□□ 1.15
RAB28-202ENST00000330852 TTC39AQ5SRH9 613 aa22.24■■□□□ 1.15
RAB28-202ENST00000330852 PICK1Q9NRD5 415 aa22.24■■□□□ 1.15
RAB28-202ENST00000330852 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
RAB28-202ENST00000330852 GNRH1P01148 92 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 KIF22Q14807 665 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 PI16Q6UXB8 463 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 TBC1D9Q6ZT07 1266 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 SH3BP5LQ7L8J4 393 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 SCYL3Q8IZE3 742 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 DDX4Q9NQI0 724 aaKnown RBP22.23■■□□□ 1.15
RAB28-202ENST00000330852 CTNND1O60716 968 aaKnown RBP22.23■■□□□ 1.15
RAB28-202ENST00000330852 NOL10Q9BSC4 688 aaKnown RBP22.23■■□□□ 1.15
RAB28-202ENST00000330852 C1orf115Q9H7X2 142 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 DOCK1Q14185 1865 aa22.23■■□□□ 1.15
RAB28-202ENST00000330852 MAST2Q6P0Q8 1798 aa22.22■■□□□ 1.15
RAB28-202ENST00000330852 RBBP6Q7Z6E9 1792 aaKnown RBP22.22■■□□□ 1.15
RAB28-202ENST00000330852 DDTLA6NHG4 134 aaPredicted RBP22.22■■□□□ 1.15
RAB28-202ENST00000330852 PICALMQ13492 652 aa22.22■■□□□ 1.15
RAB28-202ENST00000330852 ARMC5Q96C12 935 aa22.22■■□□□ 1.15
RAB28-202ENST00000330852 DBNDD2Q9BQY9 259 aa22.21■■□□□ 1.15
RAB28-202ENST00000330852 TNRC18O15417 2968 aaPredicted RBP22.21■■□□□ 1.15
RAB28-202ENST00000330852 BAG3O95817 575 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 PLCG2P16885 1265 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 FASTKD5Q7L8L6 764 aaKnown RBP22.2■■□□□ 1.14
RAB28-202ENST00000330852 PTPRFP10586 1907 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 KIAA0100Q14667 2235 aaKnown RBP22.2■■□□□ 1.14
RAB28-202ENST00000330852 PDHXO00330 501 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 PTPRAP18433 802 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 PRMT2P55345 433 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 LACTBP83111 547 aaPredicted RBP22.2■■□□□ 1.14
RAB28-202ENST00000330852 CEP85Q6P2H3 762 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 C17orf99Q6UX52 265 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 ERC1Q8IUD2 1116 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 ZHX2Q9Y6X8 837 aa22.2■■□□□ 1.14
RAB28-202ENST00000330852 PHIPQ8WWQ0 1821 aa22.19■■□□□ 1.14
RAB28-202ENST00000330852 MOGSQ13724 837 aa22.19■■□□□ 1.14
RAB28-202ENST00000330852 NAA16Q6N069 864 aaPredicted RBP22.19■■□□□ 1.14
RAB28-202ENST00000330852 NBPF11Q86T75 865 aa22.19■■□□□ 1.14
RAB28-202ENST00000330852 MYO5AQ9Y4I1 1855 aaKnown RBP22.19■■□□□ 1.14
RAB28-202ENST00000330852 PPP4CP60510 307 aa22.18■■□□□ 1.14
RAB28-202ENST00000330852 CAP1Q01518 475 aa22.18■■□□□ 1.14
RAB28-202ENST00000330852 HSP90AB4PQ58FF6 505 aa22.18■■□□□ 1.14
RAB28-202ENST00000330852 OSBPL5Q9H0X9 879 aaPredicted RBP22.18■■□□□ 1.14
RAB28-202ENST00000330852 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
RAB28-202ENST00000330852 A0A0G2JLL6 359 aaPredicted RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 TMED8Q6PL24 325 aaPredicted RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 PRRT2Q7Z6L0 340 aaPredicted RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 TEX11Q8IYF3 940 aa22.17■■□□□ 1.14
RAB28-202ENST00000330852 PARK7Q99497 189 aaKnown RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 SNRKQ9NRH2 765 aa22.17■■□□□ 1.14
RAB28-202ENST00000330852 SLC45A1Q9Y2W3 748 aa22.17■■□□□ 1.14
RAB28-202ENST00000330852 CYP2E1P05181 493 aaPredicted RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 PANK1Q8TE04 598 aa22.17■■□□□ 1.14
RAB28-202ENST00000330852 TBC1D2Q9BYX2 928 aa22.17■■□□□ 1.14
RAB28-202ENST00000330852 DHX36Q9H2U1 1008 aaKnown RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 HERC5Q9UII4 1024 aaKnown RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 DBNLQ9UJU6 430 aaKnown RBP22.17■■□□□ 1.14
RAB28-202ENST00000330852 CDK5RAP2Q96SN8 1893 aa22.17■■□□□ 1.14
RAB28-202ENST00000330852 FOCADQ5VW36 1801 aa22.16■■□□□ 1.14
RAB28-202ENST00000330852 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
RAB28-202ENST00000330852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.16■■□□□ 1.14
RAB28-202ENST00000330852 HTTP42858 3142 aa22.16■■□□□ 1.14
RAB28-202ENST00000330852 ADGRA2Q96PE1 1338 aa22.16■■□□□ 1.14
RAB28-202ENST00000330852 GPAT2Q6NUI2 795 aa22.15■■□□□ 1.14
RAB28-202ENST00000330852 CERS3Q8IU89 383 aa22.15■■□□□ 1.14
RAB28-202ENST00000330852 EAF2Q96CJ1 260 aaPredicted RBP22.15■■□□□ 1.14
RAB28-202ENST00000330852 ATAD5Q96QE3 1844 aa22.15■■□□□ 1.14
RAB28-202ENST00000330852 HOXD10P28358 340 aa22.14■■□□□ 1.14
RAB28-202ENST00000330852 SLC9C1Q4G0N8 1177 aa22.14■■□□□ 1.14
RAB28-202ENST00000330852 PI4KBQ9UBF8 816 aa22.14■■□□□ 1.14
RAB28-202ENST00000330852 PTCH2Q9Y6C5 1203 aa22.14■■□□□ 1.14
RAB28-202ENST00000330852 ZAP70P43403 619 aa22.14■■□□□ 1.13
RAB28-202ENST00000330852 RPAP2Q8IXW5 612 aaPredicted RBP22.14■■□□□ 1.13
RAB28-202ENST00000330852 SH3RF3Q8TEJ3 882 aaPredicted RBP22.14■■□□□ 1.13
RAB28-202ENST00000330852 ZNF333Q96JL9 665 aa22.14■■□□□ 1.13
RAB28-202ENST00000330852 CCDC8Q9H0W5 538 aaPredicted RBP22.14■■□□□ 1.13
RAB28-202ENST00000330852 AATFQ9NY61 560 aaKnown RBP eCLIP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms