RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 GIMAP7Q8NHV1 300 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 BCAS4Q8TDM0 211 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 A0A0G2JLW4 131 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 PPP2R5AQ15172 486 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 POLR3EQ9NVU0 708 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
RGPD6-202ENST00000330331 SALL1Q9NSC2 1324 aa17.29■□□□□ 0.36
RGPD6-202ENST00000330331 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 ZMYND10O75800 440 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 PDIA3P30101 505 aaKnown RBP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 AARSP49588 968 aaKnown RBP eCLIP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 NLRP6P59044 892 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 CD248Q9HCU0 757 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 JCADQ9P266 1359 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
RGPD6-202ENST00000330331 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
RGPD6-202ENST00000330331 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 KIF28PB7ZC32 967 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 AKR1B15C9JRZ8 316 aaPredicted RBP17.27■□□□□ 0.36
RGPD6-202ENST00000330331 H0YHG0 523 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 FOXN1O15353 648 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 BMP6P22004 513 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 STIM1Q13586 685 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 GSPT2Q8IYD1 628 aaKnown RBP17.27■□□□□ 0.36
RGPD6-202ENST00000330331 FAM76AQ8TAV0 307 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
RGPD6-202ENST00000330331 NFE2L3Q9Y4A8 694 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 PCDHA5Q9Y5H7 936 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 PEAK1Q9H792 1746 aa17.27■□□□□ 0.36
RGPD6-202ENST00000330331 ACRBPQ8NEB7 543 aa17.27■□□□□ 0.35
RGPD6-202ENST00000330331 GPHNQ9NQX3 736 aaPredicted RBP17.27■□□□□ 0.35
RGPD6-202ENST00000330331 USP54Q70EL1 1684 aa17.27■□□□□ 0.35
RGPD6-202ENST00000330331 ATF3P18847 181 aa17.26■□□□□ 0.35
RGPD6-202ENST00000330331 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.35
RGPD6-202ENST00000330331 NAPGQ99747 312 aaPredicted RBP17.26■□□□□ 0.35
RGPD6-202ENST00000330331 GNL3LQ9NVN8 582 aaKnown RBP17.26■□□□□ 0.35
RGPD6-202ENST00000330331 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
RGPD6-202ENST00000330331 CWF19L2Q2TBE0 894 aaKnown RBP17.26■□□□□ 0.35
RGPD6-202ENST00000330331 ARHGEF25Q86VW2 580 aa17.26■□□□□ 0.35
RGPD6-202ENST00000330331 METTL16Q86W50 562 aaKnown RBP17.26■□□□□ 0.35
RGPD6-202ENST00000330331 EYA1Q99502 592 aa17.26■□□□□ 0.35
RGPD6-202ENST00000330331 SHOX2O60902 331 aaPredicted RBP17.25■□□□□ 0.35
RGPD6-202ENST00000330331 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
RGPD6-202ENST00000330331 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 CCDC148Q8NFR7 591 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 CABS1Q96KC9 395 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 HINFPQ9BQA5 517 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 VIPAS39Q9H9C1 493 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 SAMSN1Q9NSI8 373 aaKnown RBP17.25■□□□□ 0.35
RGPD6-202ENST00000330331 DCCP43146 1447 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
RGPD6-202ENST00000330331 TEX33O43247 280 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 RBL2Q08999 1139 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 WHAMMP3Q1A5X7 153 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 LONRF3Q496Y0 759 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 WDR93Q6P2C0 686 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 SHC4Q6S5L8 630 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 PRPF38AQ8NAV1 312 aaKnown RBP17.25■□□□□ 0.35
RGPD6-202ENST00000330331 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 GPTP24298 496 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 GNGT1P63211 74 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 TUBB4BP68371 445 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
RGPD6-202ENST00000330331 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
RGPD6-202ENST00000330331 MST1RQ04912 1400 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 ZNF335Q9H4Z2 1342 aaPredicted RBP17.24■□□□□ 0.35
RGPD6-202ENST00000330331 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 CRACR2AQ9BSW2 395 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 LRCH2Q5VUJ6 765 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 CAPS2Q9BXY5 557 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 MYO6Q9UM54 1294 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 ZNF609O15014 1411 aa17.24■□□□□ 0.35
RGPD6-202ENST00000330331 AGPSO00116 658 aa17.23■□□□□ 0.35
RGPD6-202ENST00000330331 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
RGPD6-202ENST00000330331 TUBB2AQ13885 445 aa17.23■□□□□ 0.35
RGPD6-202ENST00000330331 COG1Q8WTW3 980 aa17.23■□□□□ 0.35
RGPD6-202ENST00000330331 TUBB2BQ9BVA1 445 aa17.23■□□□□ 0.35
RGPD6-202ENST00000330331 PPFIBP1Q86W92 1011 aa17.23■□□□□ 0.35
RGPD6-202ENST00000330331 TUBBP07437 444 aa17.22■□□□□ 0.35
RGPD6-202ENST00000330331 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
RGPD6-202ENST00000330331 ELF1P32519 619 aa17.22■□□□□ 0.35
RGPD6-202ENST00000330331 USP14P54578 494 aa17.22■□□□□ 0.35
RGPD6-202ENST00000330331 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
RGPD6-202ENST00000330331 N4BP2L2Q92802 583 aaPredicted RBP17.22■□□□□ 0.35
RGPD6-202ENST00000330331 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
RGPD6-202ENST00000330331 SUCLG2Q96I99 432 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms