RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 AK9Q5TCS8 1911 aa18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 PLIN1O60240 522 aa18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 GYG1P46976 350 aa18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 ATXN2LQ8WWM7 1075 aaKnown RBP18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 C1QTNF1Q9BXJ1 281 aa18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 PRKAG2Q9UGJ0 569 aa18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
CTHRC1-201ENST00000330295 ELL2O00472 640 aaPredicted RBP18.85■□□□□ 0.61
CTHRC1-201ENST00000330295 CASP7P55210 303 aa18.85■□□□□ 0.61
CTHRC1-201ENST00000330295 FAM151AQ8WW52 585 aa18.85■□□□□ 0.61
CTHRC1-201ENST00000330295 UHRF1Q96T88 793 aaPredicted RBP18.85■□□□□ 0.61
CTHRC1-201ENST00000330295 PLXNB2O15031 1838 aa18.84■□□□□ 0.61
CTHRC1-201ENST00000330295 IFIT5Q13325 482 aaKnown RBP18.84■□□□□ 0.61
CTHRC1-201ENST00000330295 FAM84BQ96KN1 310 aaPredicted RBP18.84■□□□□ 0.61
CTHRC1-201ENST00000330295 ASB2Q96Q27 587 aa18.84■□□□□ 0.61
CTHRC1-201ENST00000330295 MRIQ9BWK5 157 aa18.84■□□□□ 0.61
CTHRC1-201ENST00000330295 AFG3L2Q9Y4W6 797 aa18.84■□□□□ 0.61
CTHRC1-201ENST00000330295 GCKRQ14397 625 aa18.83■□□□□ 0.6
CTHRC1-201ENST00000330295 LHX8Q68G74 356 aa18.83■□□□□ 0.6
CTHRC1-201ENST00000330295 TBC1D22AQ8WUA7 517 aa18.83■□□□□ 0.6
CTHRC1-201ENST00000330295 PICK1Q9NRD5 415 aa18.83■□□□□ 0.6
CTHRC1-201ENST00000330295 HCN4Q9Y3Q4 1203 aa18.83■□□□□ 0.6
CTHRC1-201ENST00000330295 DNAH12Q6ZR08 3092 aa18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 PTPRAP18433 802 aa18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 SCYL3Q8IZE3 742 aa18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 SNX27Q96L92 541 aa18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 PNMA3Q9UL41 463 aa18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 AGTPBP1Q9UPW5 1226 aa18.82■□□□□ 0.6
CTHRC1-201ENST00000330295 TCP10Q12799 353 aa18.81■□□□□ 0.6
CTHRC1-201ENST00000330295 CHAF1AQ13111 956 aaPredicted RBP18.81■□□□□ 0.6
CTHRC1-201ENST00000330295 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
CTHRC1-201ENST00000330295 GRIN2CQ14957 1233 aa18.81■□□□□ 0.6
CTHRC1-201ENST00000330295 CCDC30Q5VVM6 783 aa18.81■□□□□ 0.6
CTHRC1-201ENST00000330295 THEGQ9P2T0 379 aa18.81■□□□□ 0.6
CTHRC1-201ENST00000330295 CYP2B6P20813 491 aa18.8■□□□□ 0.6
CTHRC1-201ENST00000330295 GCLCP48506 637 aaPredicted RBP18.8■□□□□ 0.6
CTHRC1-201ENST00000330295 IQSEC3Q9UPP2 1182 aaPredicted RBP18.8■□□□□ 0.6
CTHRC1-201ENST00000330295 CHMP3Q9Y3E7 222 aa18.8■□□□□ 0.6
CTHRC1-201ENST00000330295 FRMPD3Q5JV73 1810 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 PHIPQ8WWQ0 1821 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 MAST3O60307 1309 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 PHF20L1A8MW92 1017 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 CCND3P30281 292 aaPredicted RBP18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 TREML2Q5T2D2 321 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 HHIPL2Q6UWX4 724 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 LDHAL6AQ6ZMR3 332 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 CNNM1Q9NRU3 951 aa18.79■□□□□ 0.6
CTHRC1-201ENST00000330295 TRIM75PA6NK02 468 aa18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 ZNF853P0CG23 659 aa18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 XRCC5P13010 732 aaKnown RBP18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 ATN1P54259 1190 aaPredicted RBP18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 MRPS5P82675 430 aaKnown RBP18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 ZNF594Q96JF6 807 aaPredicted RBP18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 CHMP4AQ9BY43 222 aa18.78■□□□□ 0.6
CTHRC1-201ENST00000330295 RTP1P59025 263 aa18.77■□□□□ 0.6
CTHRC1-201ENST00000330295 PPM1EQ8WY54 764 aa18.77■□□□□ 0.6
CTHRC1-201ENST00000330295 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
CTHRC1-201ENST00000330295 DOCK1Q14185 1865 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 ZKSCAN1P17029 563 aaPredicted RBP18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 FOXO4P98177 505 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 NFIAQ12857 509 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 FBXO33Q7Z6M2 555 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 VPS37DQ86XT2 251 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 TRMT44Q8IYL2 757 aaKnown RBP18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 IL27Q8NEV9 243 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 BADQ92934 168 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 NUDT12Q9BQG2 462 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 SUGT1Q9Y2Z0 365 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 ATRNL1Q5VV63 1379 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 DOCK2Q92608 1830 aa18.76■□□□□ 0.59
CTHRC1-201ENST00000330295 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
CTHRC1-201ENST00000330295 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
CTHRC1-201ENST00000330295 TAF7LQ5H9L4 462 aa18.75■□□□□ 0.59
CTHRC1-201ENST00000330295 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
CTHRC1-201ENST00000330295 LRFN3Q9BTN0 628 aa18.75■□□□□ 0.59
CTHRC1-201ENST00000330295 PDE3AQ14432 1141 aa18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 CCDC57Q2TAC2 916 aa18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 ALYREFQ86V81 257 aaKnown RBP18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 PROCA1Q8NCQ7 364 aaPredicted RBP18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 PRDM5Q9NQX1 630 aaPredicted RBP18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 FAM198AQ9UFP1 575 aa18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 ATP11BQ9Y2G3 1177 aa18.74■□□□□ 0.59
CTHRC1-201ENST00000330295 CDC42EP5Q6NZY7 148 aa18.73■□□□□ 0.59
CTHRC1-201ENST00000330295 RNPC3Q96LT9 517 aaKnown RBP18.73■□□□□ 0.59
CTHRC1-201ENST00000330295 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
CTHRC1-201ENST00000330295 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
CTHRC1-201ENST00000330295 LOC285556D6RIA3 1793 aa18.73■□□□□ 0.59
CTHRC1-201ENST00000330295 DNAJB2P25686 324 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 AKNAD1Q5T1N1 836 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 POTEEQ6S8J3 1075 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 LMBR1LQ6UX01 489 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 NECAB3Q96P71 396 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms