RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 INPP5BP32019 993 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 BTDP43251 543 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 RGS3P49796 1198 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 GSTO1P78417 241 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 MECOMQ03112 1051 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 TNNI3KQ59H18 835 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 ZNF384Q8TF68 577 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 NSUN4Q96CB9 384 aaKnown RBP16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 FPGT-TNNI3KV9GXZ4 949 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
GTF3C6-201ENST00000329970 MCAMP43121 646 aa16.71■□□□□ 0.27
GTF3C6-201ENST00000329970 RHBDL3P58872 404 aa16.71■□□□□ 0.27
GTF3C6-201ENST00000329970 ITPRIPQ8IWB1 547 aa16.71■□□□□ 0.27
GTF3C6-201ENST00000329970 ZFPM1Q8IX07 1006 aa16.71■□□□□ 0.27
GTF3C6-201ENST00000329970 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 CENPFP49454 3210 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 BTBD19C9JJ37 291 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 TLR2O60603 784 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 SOX10P56693 466 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 ARHGEF6Q15052 776 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 SH3BP5LQ7L8J4 393 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 PTPN22Q9Y2R2 807 aa16.7■□□□□ 0.26
GTF3C6-201ENST00000329970 TBC1D12O60347 775 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 CCDC158Q5M9N0 1113 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 ANKRD23Q86SG2 305 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 MGAMO43451 1857 aa16.69■□□□□ 0.26
GTF3C6-201ENST00000329970 SIPA1L1O43166 1804 aa16.68■□□□□ 0.26
GTF3C6-201ENST00000329970 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
GTF3C6-201ENST00000329970 CXCL11O14625 94 aa16.68■□□□□ 0.26
GTF3C6-201ENST00000329970 MS4A1P11836 297 aa16.68■□□□□ 0.26
GTF3C6-201ENST00000329970 ZSWIM8A7E2V4 1837 aa16.68■□□□□ 0.26
GTF3C6-201ENST00000329970 GNRH1P01148 92 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 CAP1Q01518 475 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 MOGSQ13724 837 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 TBC1D9Q6ZT07 1266 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 C1orf115Q9H7X2 142 aa16.67■□□□□ 0.26
GTF3C6-201ENST00000329970 CTNND1O60716 968 aaKnown RBP16.66■□□□□ 0.26
GTF3C6-201ENST00000329970 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
GTF3C6-201ENST00000329970 RAI14Q9P0K7 980 aa16.66■□□□□ 0.26
GTF3C6-201ENST00000329970 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
GTF3C6-201ENST00000329970 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
GTF3C6-201ENST00000329970 ADGRA2Q96PE1 1338 aa16.66■□□□□ 0.26
GTF3C6-201ENST00000329970 PTPRAP18433 802 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 PPP4CP60510 307 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 LACTBP83111 547 aaPredicted RBP16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 PICALMQ13492 652 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 C17orf99Q6UX52 265 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 PICK1Q9NRD5 415 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 BRCA2P51587 3418 aa16.65■□□□□ 0.26
GTF3C6-201ENST00000329970 MYH1P12882 1939 aa16.64■□□□□ 0.26
GTF3C6-201ENST00000329970 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 PDHXO00330 501 aa16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 PLCG2P16885 1265 aa16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 PRMT2P55345 433 aa16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 SLC45A1Q9Y2W3 748 aa16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 AFG3L2Q9Y4W6 797 aa16.64■□□□□ 0.25
GTF3C6-201ENST00000329970 BAG3O95817 575 aa16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 KIF22Q14807 665 aa16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 EAF2Q96CJ1 260 aaPredicted RBP16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 NOL10Q9BSC4 688 aaKnown RBP16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
GTF3C6-201ENST00000329970 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
GTF3C6-201ENST00000329970 TEX11Q8IYF3 940 aa16.62■□□□□ 0.25
GTF3C6-201ENST00000329970 PARK7Q99497 189 aaKnown RBP16.62■□□□□ 0.25
GTF3C6-201ENST00000329970 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
GTF3C6-201ENST00000329970 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
GTF3C6-201ENST00000329970 ZHX2Q9Y6X8 837 aa16.62■□□□□ 0.25
GTF3C6-201ENST00000329970 ZAP70P43403 619 aa16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 METTL16Q86W50 562 aaKnown RBP16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms