RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 CXCL11O14625 94 aa28.76■■■□□ 2.19
TMEM54-201ENST00000329151 FMNL1O95466 1100 aaPredicted RBP28.76■■■□□ 2.19
TMEM54-201ENST00000329151 LDHCP07864 332 aa28.76■■■□□ 2.19
TMEM54-201ENST00000329151 EN2P19622 333 aaPredicted RBP28.76■■■□□ 2.19
TMEM54-201ENST00000329151 ZFPM1Q8IX07 1006 aa28.76■■■□□ 2.19
TMEM54-201ENST00000329151 ARHGAP39Q9C0H5 1083 aa28.76■■■□□ 2.19
TMEM54-201ENST00000329151 FASTKD5Q7L8L6 764 aaKnown RBP28.75■■■□□ 2.19
TMEM54-201ENST00000329151 SCYL3Q8IZE3 742 aa28.75■■■□□ 2.19
TMEM54-201ENST00000329151 ZHX2Q9Y6X8 837 aa28.75■■■□□ 2.19
TMEM54-201ENST00000329151 ZSWIM8A7E2V4 1837 aa28.75■■■□□ 2.19
TMEM54-201ENST00000329151 TRIM27P14373 513 aa28.74■■■□□ 2.19
TMEM54-201ENST00000329151 PSMC4P43686 418 aa28.74■■■□□ 2.19
TMEM54-201ENST00000329151 C17orf99Q6UX52 265 aa28.74■■■□□ 2.19
TMEM54-201ENST00000329151 CLUAP1Q96AJ1 413 aa28.74■■■□□ 2.19
TMEM54-201ENST00000329151 FAM163AQ96GL9 167 aaPredicted RBP28.74■■■□□ 2.19
TMEM54-201ENST00000329151 NOL10Q9BSC4 688 aaKnown RBP28.74■■■□□ 2.19
TMEM54-201ENST00000329151 OS9Q13438 667 aaPredicted RBP28.73■■■□□ 2.19
TMEM54-201ENST00000329151 GADL1Q6ZQY3 521 aa28.73■■■□□ 2.19
TMEM54-201ENST00000329151 RAET1EQ8TD07 263 aa28.73■■■□□ 2.19
TMEM54-201ENST00000329151 SH3TC2Q8TF17 1288 aa28.73■■■□□ 2.19
TMEM54-201ENST00000329151 RAI14Q9P0K7 980 aa28.73■■■□□ 2.19
TMEM54-201ENST00000329151 MECOMQ03112 1051 aa28.72■■■□□ 2.19
TMEM54-201ENST00000329151 SPATA5Q8NB90 893 aa28.72■■■□□ 2.19
TMEM54-201ENST00000329151 DOCK1Q14185 1865 aa28.72■■■□□ 2.19
TMEM54-201ENST00000329151 BCAR3O75815 825 aa28.7■■■□□ 2.18
TMEM54-201ENST00000329151 UQCRFS1P1P0C7P4 283 aa28.7■■■□□ 2.18
TMEM54-201ENST00000329151 HMG20BQ9P0W2 317 aa28.7■■■□□ 2.18
TMEM54-201ENST00000329151 LRP2BPQ9P2M1 347 aa28.7■■■□□ 2.18
TMEM54-201ENST00000329151 BIN2Q9UBW5 565 aaPredicted RBP28.7■■■□□ 2.18
TMEM54-201ENST00000329151 SRRDQ9UH36 339 aa28.7■■■□□ 2.18
TMEM54-201ENST00000329151 CTNND1O60716 968 aaKnown RBP28.69■■■□□ 2.18
TMEM54-201ENST00000329151 FCGRTP55899 365 aa28.69■■■□□ 2.18
TMEM54-201ENST00000329151 ZKSCAN2Q63HK3 967 aa28.69■■■□□ 2.18
TMEM54-201ENST00000329151 ATRNL1Q5VV63 1379 aa28.68■■■□□ 2.18
TMEM54-201ENST00000329151 GPR75-ASB3A0A0A6YYF3 556 aa28.68■■■□□ 2.18
TMEM54-201ENST00000329151 DDTLA6NHG4 134 aaPredicted RBP28.68■■■□□ 2.18
TMEM54-201ENST00000329151 PHF20L1A8MW92 1017 aa28.68■■■□□ 2.18
TMEM54-201ENST00000329151 MAP4K4O95819 1239 aaPredicted RBP28.68■■■□□ 2.18
TMEM54-201ENST00000329151 PTPRAP18433 802 aa28.68■■■□□ 2.18
TMEM54-201ENST00000329151 TRIM47Q96LD4 638 aa28.68■■■□□ 2.18
TMEM54-201ENST00000329151 MYPNQ86TC9 1320 aa28.68■■■□□ 2.18
TMEM54-201ENST00000329151 RFX7Q2KHR2 1363 aa28.67■■■□□ 2.18
TMEM54-201ENST00000329151 A0A0G2JLL6 359 aaPredicted RBP28.67■■■□□ 2.18
TMEM54-201ENST00000329151 PRRT2Q7Z6L0 340 aaPredicted RBP28.67■■■□□ 2.18
TMEM54-201ENST00000329151 FTSJ3Q8IY81 847 aaKnown RBP28.67■■■□□ 2.18
TMEM54-201ENST00000329151 SMCR8Q8TEV9 937 aaPredicted RBP28.67■■■□□ 2.18
TMEM54-201ENST00000329151 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.67■■■□□ 2.18
TMEM54-201ENST00000329151 DDX4Q9NQI0 724 aaKnown RBP28.67■■■□□ 2.18
TMEM54-201ENST00000329151 MGAMO43451 1857 aa28.67■■■□□ 2.18
TMEM54-201ENST00000329151 PNMA6EA0A0J9YXQ4 647 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 CYP2C8P10632 490 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 OSBPP22059 807 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 TTC39AQ5SRH9 613 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 TBC1D9Q6ZT07 1266 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 SH3BP5LQ7L8J4 393 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 PCDH10Q9P2E7 1040 aa28.66■■■□□ 2.18
TMEM54-201ENST00000329151 PTPRFP10586 1907 aa28.65■■■□□ 2.18
TMEM54-201ENST00000329151 TRIM75PA6NK02 468 aa28.65■■■□□ 2.18
TMEM54-201ENST00000329151 ARID4AP29374 1257 aaPredicted RBP28.65■■■□□ 2.18
TMEM54-201ENST00000329151 MOGSQ13724 837 aa28.65■■■□□ 2.18
TMEM54-201ENST00000329151 CCDC158Q5M9N0 1113 aa28.65■■■□□ 2.18
TMEM54-201ENST00000329151 NSUN4Q96CB9 384 aaKnown RBP28.65■■■□□ 2.18
TMEM54-201ENST00000329151 AFG3L2Q9Y4W6 797 aa28.65■■■□□ 2.18
TMEM54-201ENST00000329151 MKI67P46013 3256 aaKnown RBP28.64■■■□□ 2.18
TMEM54-201ENST00000329151 NPM3O75607 178 aaKnown RBP28.64■■■□□ 2.18
TMEM54-201ENST00000329151 GRK4P32298 578 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 UBXN2AP68543 259 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 GPAT2Q6NUI2 795 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 PI16Q6UXB8 463 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 TEX11Q8IYF3 940 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 TMEM57Q8N5G2 664 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 TNNQ9UQP3 1299 aa28.64■■■□□ 2.18
TMEM54-201ENST00000329151 ADGRA2Q96PE1 1338 aa28.64■■■□□ 2.17
TMEM54-201ENST00000329151 BAG3O95817 575 aa28.63■■■□□ 2.17
TMEM54-201ENST00000329151 RHBDL3P58872 404 aa28.63■■■□□ 2.17
TMEM54-201ENST00000329151 MAP3K10Q02779 954 aa28.63■■■□□ 2.17
TMEM54-201ENST00000329151 PNMA3Q9UL41 463 aa28.63■■■□□ 2.17
TMEM54-201ENST00000329151 SLC45A1Q9Y2W3 748 aa28.63■■■□□ 2.17
TMEM54-201ENST00000329151 CEP290O15078 2479 aa28.63■■■□□ 2.17
TMEM54-201ENST00000329151 TBC1D12O60347 775 aa28.62■■■□□ 2.17
TMEM54-201ENST00000329151 NKX2-3Q8TAU0 364 aa28.62■■■□□ 2.17
TMEM54-201ENST00000329151 BRCA2P51587 3418 aa28.62■■■□□ 2.17
TMEM54-201ENST00000329151 BCRP11274 1271 aa28.61■■■□□ 2.17
TMEM54-201ENST00000329151 MCAMP43121 646 aa28.61■■■□□ 2.17
TMEM54-201ENST00000329151 HNRNPUQ00839 825 aaKnown RBP eCLIP28.61■■■□□ 2.17
TMEM54-201ENST00000329151 TRIM34Q9BYJ4 488 aa28.61■■■□□ 2.17
TMEM54-201ENST00000329151 OSBPL5Q9H0X9 879 aaPredicted RBP28.61■■■□□ 2.17
TMEM54-201ENST00000329151 PHIPQ8WWQ0 1821 aa28.6■■■□□ 2.17
TMEM54-201ENST00000329151 ATAD5Q96QE3 1844 aa28.6■■■□□ 2.17
TMEM54-201ENST00000329151 PLCG2P16885 1265 aa28.6■■■□□ 2.17
TMEM54-201ENST00000329151 CTGFP29279 349 aa28.6■■■□□ 2.17
TMEM54-201ENST00000329151 NAA16Q6N069 864 aaPredicted RBP28.6■■■□□ 2.17
TMEM54-201ENST00000329151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.6■■■□□ 2.17
TMEM54-201ENST00000329151 FAM196BA6NMK8 535 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 SURF6O75683 361 aaKnown RBP28.59■■■□□ 2.17
TMEM54-201ENST00000329151 PRKCZQ05513 592 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 PABPC4Q13310 644 aaKnown RBP eCLIP28.59■■■□□ 2.171e-6■■■□□ 16.1
TMEM54-201ENST00000329151 ITPRIPQ8IWB1 547 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 SLAIN1Q8ND83 568 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 TBC1D2Q9BYX2 928 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms