RNA–Protein interactions for RNA: ENST00000328834.9

CNOT10-201, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT10, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-201ENST00000328834 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 SMYD4Q8IYR2 804 aaPredicted RBP17.08■□□□□ 0.33
CNOT10-201ENST00000328834 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 CPLX3Q8WVH0 158 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 CARD6Q9BX69 1037 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 KCNH3Q9ULD8 1083 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 PCDHB6Q9Y5E3 794 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 COL18A1P39060 1754 aa17.08■□□□□ 0.33
CNOT10-201ENST00000328834 ALS2Q96Q42 1657 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 PRDM1O75626 825 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 TOB1P50616 345 aaPredicted RBP17.08■□□□□ 0.32
CNOT10-201ENST00000328834 CLCN6P51797 869 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 EVA1CP58658 441 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 EVX2Q03828 476 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
CNOT10-201ENST00000328834 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
CNOT10-201ENST00000328834 SERTAD1Q9UHV2 236 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
CNOT10-201ENST00000328834 IL2RBP14784 551 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 WDR24Q96S15 920 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 SAMSN1Q9NSI8 373 aaKnown RBP17.07■□□□□ 0.32
CNOT10-201ENST00000328834 CPDO75976 1380 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 MYL5Q02045 173 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 NLRP10Q86W26 655 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
CNOT10-201ENST00000328834 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
CNOT10-201ENST00000328834 CYP2D7A0A087X1C5 515 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 KIF1AQ12756 1690 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 WNT7AO00755 349 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 POLR3GO15318 223 aaPredicted RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 AFMP43652 599 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 TRIM65Q6PJ69 517 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 CREBRFQ8IUR6 639 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 CCDC150Q8NCX0 1101 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 MED15Q96RN5 788 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.322e-8■■■■□ 21.2
CNOT10-201ENST00000328834 HPSEQ9Y251 543 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 PCCAP05165 728 aaPredicted RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 BCAMP50895 628 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 DIS3L2Q8IYB7 885 aaKnown RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 LCORLQ8N3X6 602 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 SDR42E1Q8WUS8 393 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 STRBPQ96SI9 672 aaKnown RBP17.06■□□□□ 0.32
CNOT10-201ENST00000328834 NAPBQ9H115 298 aa17.06■□□□□ 0.32
CNOT10-201ENST00000328834 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 CSF1RP07333 972 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
CNOT10-201ENST00000328834 CTSWP56202 376 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 TPM4P67936 248 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 RASGRF1Q13972 1273 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 TRIM29Q14134 588 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 EARS2Q5JPH6 523 aaKnown RBP17.05■□□□□ 0.32
CNOT10-201ENST00000328834 KRBA2Q6ZNG9 492 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 KRT222Q8N1A0 295 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 IMPACTQ9P2X3 320 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 MINDY4BA8MYZ0 360 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 ERVV-2B6SEH9 535 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 RESP18Q5W5W9 173 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 REXO1L1PQ8IX06 675 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
CNOT10-201ENST00000328834 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 NFE2L3Q9Y4A8 694 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
CNOT10-201ENST00000328834 SYCP1Q15431 976 aa17.04■□□□□ 0.32
CNOT10-201ENST00000328834 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
CNOT10-201ENST00000328834 MAN1B1Q9UKM7 699 aa17.04■□□□□ 0.32
CNOT10-201ENST00000328834 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
CNOT10-201ENST00000328834 CABP5Q9NP86 173 aa17.04■□□□□ 0.32
CNOT10-201ENST00000328834 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 VWA3AA6NCI4 1184 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 TEX33O43247 280 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 PDE8BO95263 885 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 TDO2P48775 406 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 ETF1P62495 437 aaKnown RBP17.03■□□□□ 0.32
CNOT10-201ENST00000328834 SSRP1Q08945 709 aaKnown RBP17.03■□□□□ 0.32
CNOT10-201ENST00000328834 CCDC93Q567U6 631 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 VGLL2Q8N8G2 317 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 CCDC34Q96HJ3 373 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 BPIFA3Q9BQP9 254 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 GYS2P54840 703 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 VSTM4Q8IW00 320 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.03■□□□□ 0.32
CNOT10-201ENST00000328834 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
CNOT10-201ENST00000328834 A0A087X0B3 334 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms