RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 PDE11AQ9HCR9 933 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 GPHNQ9NQX3 736 aaPredicted RBP12.89□□□□□ -0.35
GINS3-202ENST00000328514 KCNH3Q9ULD8 1083 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 ADGRG1Q9Y653 693 aa12.89□□□□□ -0.35
GINS3-202ENST00000328514 M0R2C6 588 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 ZFYP08048 801 aaPredicted RBP12.88□□□□□ -0.35
GINS3-202ENST00000328514 CDC27P30260 824 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 GYS2P54840 703 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 ANTXR2P58335 489 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 FAM71BQ8TC56 605 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
GINS3-202ENST00000328514 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 RAI14Q9P0K7 980 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 CDKL5O76039 1030 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
GINS3-202ENST00000328514 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
GINS3-202ENST00000328514 MORC3Q14149 939 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 RASGRP2Q7LDG7 609 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 CNNM3Q8NE01 707 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
GINS3-202ENST00000328514 AFDNP55196 1824 aaKnown RBP12.87□□□□□ -0.35
GINS3-202ENST00000328514 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
GINS3-202ENST00000328514 KIF5CO60282 957 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
GINS3-202ENST00000328514 PDILTQ8N807 584 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 SPATA20Q8TB22 786 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 OSBP2Q969R2 916 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 GJB4Q9NTQ9 266 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 VPS18Q9P253 973 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
GINS3-202ENST00000328514 PBX1P40424 430 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 ICE2Q659A1 982 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 KRT40Q6A162 431 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 WDR93Q6P2C0 686 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 APTXQ7Z2E3 356 aaKnown RBP12.86□□□□□ -0.35
GINS3-202ENST00000328514 PNKPQ96T60 521 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
GINS3-202ENST00000328514 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 ABCC12Q96J65 1359 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 CIAO1O76071 339 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 FGAP02671 866 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 IFIT1P09914 478 aaKnown RBP12.86□□□□□ -0.35
GINS3-202ENST00000328514 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
GINS3-202ENST00000328514 FOXO4P98177 505 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 FMR1Q06787 632 aaKnown RBP eCLIP12.86□□□□□ -0.35
GINS3-202ENST00000328514 POSTNQ15063 836 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
GINS3-202ENST00000328514 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 ABCB6Q9NP58 842 aa12.86□□□□□ -0.35
GINS3-202ENST00000328514 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 A0A087WZG4 1122 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 H7C1W4 665 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 CORO7P57737 925 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 MCM6Q14566 821 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 CASP8Q14790 479 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
GINS3-202ENST00000328514 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
GINS3-202ENST00000328514 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 STRCP1A6NGW2 1772 aa12.85□□□□□ -0.35
GINS3-202ENST00000328514 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 SEMA3EO15041 775 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 CPP00450 1065 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 MYL6BP14649 208 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 PLCD1P51178 756 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 IRX3P78415 501 aaPredicted RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 TTC39AQ5SRH9 613 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 KANK3Q6NY19 840 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 PPM1EQ8WY54 764 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 NEUROD6Q96NK8 337 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 MED15Q96RN5 788 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 TEX13AQ9BXU3 409 aaPredicted RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 IRX2Q9BZI1 471 aaPredicted RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 ANGEL1Q9UNK9 670 aaKnown RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 STK36Q9NRP7 1315 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 EIF3CLB5ME19 914 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms