RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 PRMT2P55345 433 aa21.81■■□□□ 1.08
PTPMT1-201ENST00000326656 HNRNPUQ00839 825 aaKnown RBP eCLIP21.81■■□□□ 1.08
PTPMT1-201ENST00000326656 POLA2Q14181 598 aa21.81■■□□□ 1.08
PTPMT1-201ENST00000326656 NBPF11Q86T75 865 aa21.81■■□□□ 1.08
PTPMT1-201ENST00000326656 TNNQ9UQP3 1299 aa21.81■■□□□ 1.08
PTPMT1-201ENST00000326656 LACTBP83111 547 aaPredicted RBP21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 ATP8B2P98198 1209 aa21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 PRPF38BQ5VTL8 546 aaKnown RBP21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 C17orf99Q6UX52 265 aa21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 ZSCAN29Q8IWY8 852 aaPredicted RBP21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 PICK1Q9NRD5 415 aa21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 DOCK2Q92608 1830 aa21.8■■□□□ 1.08
PTPMT1-201ENST00000326656 RBBP6Q7Z6E9 1792 aaKnown RBP21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 KIAA0100Q14667 2235 aaKnown RBP21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 TBC1D12O60347 775 aa21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 CTNND1O60716 968 aaKnown RBP21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 CAP1Q01518 475 aa21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 SH3BP5LQ7L8J4 393 aa21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 SCYL3Q8IZE3 742 aa21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 MIER1Q8N108 512 aa21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 NSUN4Q96CB9 384 aaKnown RBP21.79■■□□□ 1.08
PTPMT1-201ENST00000326656 PDHXO00330 501 aa21.78■■□□□ 1.08
PTPMT1-201ENST00000326656 RHBDL3P58872 404 aa21.78■■□□□ 1.08
PTPMT1-201ENST00000326656 FASTKD5Q7L8L6 764 aaKnown RBP21.78■■□□□ 1.08
PTPMT1-201ENST00000326656 ZNF384Q8TF68 577 aa21.78■■□□□ 1.08
PTPMT1-201ENST00000326656 MOGSQ13724 837 aa21.77■■□□□ 1.08
PTPMT1-201ENST00000326656 FTSJ3Q8IY81 847 aaKnown RBP21.77■■□□□ 1.08
PTPMT1-201ENST00000326656 ZHX2Q9Y6X8 837 aa21.77■■□□□ 1.08
PTPMT1-201ENST00000326656 DDTLA6NHG4 134 aaPredicted RBP21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 PTPRAP18433 802 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 ZNF333Q96JL9 665 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 ZNF512BQ96KM6 892 aaPredicted RBP21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 TMEM106CQ9BVX2 250 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 DDX4Q9NQI0 724 aaKnown RBP21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 RAI14Q9P0K7 980 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 LRP2BPQ9P2M1 347 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 NOP58Q9Y2X3 529 aaKnown RBP21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 AFG3L2Q9Y4W6 797 aa21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 COL2A1P02458 1487 aaPredicted RBP21.76■■□□□ 1.07
PTPMT1-201ENST00000326656 ZBTB7BO15156 539 aaPredicted RBP21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 MCAMP43121 646 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 PICALMQ13492 652 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 TNNI3KQ59H18 835 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 TBC1D9Q6ZT07 1266 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 PARK7Q99497 189 aaKnown RBP21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 SLC45A1Q9Y2W3 748 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 PTCH2Q9Y6C5 1203 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 FPGT-TNNI3KV9GXZ4 949 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 ADGRA2Q96PE1 1338 aa21.75■■□□□ 1.07
PTPMT1-201ENST00000326656 A0A0G2JLL6 359 aaPredicted RBP21.74■■□□□ 1.07
PTPMT1-201ENST00000326656 POTEFA5A3E0 1075 aa21.74■■□□□ 1.07
PTPMT1-201ENST00000326656 HOXD10P28358 340 aa21.74■■□□□ 1.07
PTPMT1-201ENST00000326656 OS9Q13438 667 aaPredicted RBP21.74■■□□□ 1.07
PTPMT1-201ENST00000326656 PI16Q6UXB8 463 aa21.74■■□□□ 1.07
PTPMT1-201ENST00000326656 PRRT2Q7Z6L0 340 aaPredicted RBP21.74■■□□□ 1.07
PTPMT1-201ENST00000326656 PLCG2P16885 1265 aa21.73■■□□□ 1.07
PTPMT1-201ENST00000326656 GPAT2Q6NUI2 795 aa21.73■■□□□ 1.07
PTPMT1-201ENST00000326656 NOL10Q9BSC4 688 aaKnown RBP21.73■■□□□ 1.07
PTPMT1-201ENST00000326656 CENPFP49454 3210 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 BAG3O95817 575 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 PSMC4P43686 418 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 TTC39AQ5SRH9 613 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 ITPRIPQ8IWB1 547 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 TBC1D2Q9BYX2 928 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 ARHGAP39Q9C0H5 1083 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 OSBPL5Q9H0X9 879 aaPredicted RBP21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 CPA4Q9UI42 421 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 ZBED9Q6R2W3 1325 aa21.72■■□□□ 1.07
PTPMT1-201ENST00000326656 DOCK1Q14185 1865 aa21.71■■□□□ 1.07
PTPMT1-201ENST00000326656 PPP4CP60510 307 aa21.71■■□□□ 1.07
PTPMT1-201ENST00000326656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.71■■□□□ 1.07
PTPMT1-201ENST00000326656 SRRDQ9UH36 339 aa21.71■■□□□ 1.07
PTPMT1-201ENST00000326656 BCRP11274 1271 aa21.7■■□□□ 1.06
PTPMT1-201ENST00000326656 NAA16Q6N069 864 aaPredicted RBP21.7■■□□□ 1.06
PTPMT1-201ENST00000326656 DBNDD2Q9BQY9 259 aa21.7■■□□□ 1.06
PTPMT1-201ENST00000326656 DHX36Q9H2U1 1008 aaKnown RBP21.7■■□□□ 1.06
PTPMT1-201ENST00000326656 HERC5Q9UII4 1024 aaKnown RBP21.7■■□□□ 1.06
PTPMT1-201ENST00000326656 FMNL1O95466 1100 aaPredicted RBP21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 MS4A1P11836 297 aa21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 RLBP1P12271 317 aa21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 TMED8Q6PL24 325 aaPredicted RBP21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 TEX11Q8IYF3 940 aa21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 TRIM47Q96LD4 638 aa21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 PI4KBQ9UBF8 816 aa21.69■■□□□ 1.06
PTPMT1-201ENST00000326656 EN2P19622 333 aaPredicted RBP21.68■■□□□ 1.06
PTPMT1-201ENST00000326656 SNRKQ9NRH2 765 aa21.68■■□□□ 1.06
PTPMT1-201ENST00000326656 PHIPQ8WWQ0 1821 aa21.68■■□□□ 1.06
PTPMT1-201ENST00000326656 PTPRFP10586 1907 aa21.68■■□□□ 1.06
PTPMT1-201ENST00000326656 CYP2E1P05181 493 aaPredicted RBP21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 CYP2C8P10632 490 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 OSBPP22059 807 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 FCGRTP55899 365 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 SLC4A8Q2Y0W8 1093 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 GADL1Q6ZQY3 521 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms