RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ATN1P54259 1190 aaPredicted RBP8.75□□□□□ -1.01
CSTF3-201ENST00000323959 DCAF15Q66K64 600 aa8.75□□□□□ -1.01
CSTF3-201ENST00000323959 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
CSTF3-201ENST00000323959 TRMT112Q9UI30 125 aaKnown RBP8.75□□□□□ -1.01
CSTF3-201ENST00000323959 SPTBN4Q9H254 2564 aa8.75□□□□□ -1.01
CSTF3-201ENST00000323959 HSPA5P11021 654 aaKnown RBP8.74□□□□□ -1.01
CSTF3-201ENST00000323959 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 NOL9Q5SY16 702 aaKnown RBP8.74□□□□□ -1.01
CSTF3-201ENST00000323959 PSRC1Q6PGN9 363 aaPredicted RBP8.74□□□□□ -1.01
CSTF3-201ENST00000323959 FAM86C1Q9NVL1 165 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 GBF1Q92538 1859 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 EPG5Q9HCE0 2579 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 C19orf67A6NJJ6 358 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 CLTBP09497 229 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 CYP2C8P10632 490 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 HSP90B1P14625 803 aaKnown RBP8.74□□□□□ -1.01
CSTF3-201ENST00000323959 TTLL5Q6EMB2 1281 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 ARRDC4Q8NCT1 418 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 WRNIP1Q96S55 665 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 ALG13Q9NP73 1137 aaKnown RBP8.74□□□□□ -1.01
CSTF3-201ENST00000323959 FAM50BQ9Y247 325 aa8.74□□□□□ -1.01
CSTF3-201ENST00000323959 EYSQ5T1H1 3165 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 GCLCP48506 637 aaPredicted RBP8.73□□□□□ -1.01
CSTF3-201ENST00000323959 CACNB2Q08289 660 aaPredicted RBP8.73□□□□□ -1.01
CSTF3-201ENST00000323959 HERC4Q5GLZ8 1057 aaPredicted RBP8.73□□□□□ -1.01
CSTF3-201ENST00000323959 SAMD1Q6SPF0 538 aaPredicted RBP8.73□□□□□ -1.01
CSTF3-201ENST00000323959 SH2B1Q9NRF2 756 aaPredicted RBP8.73□□□□□ -1.01
CSTF3-201ENST00000323959 LMCD1Q9NZU5 365 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 CCER2I3L3R5 266 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 RAG1P15918 1043 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 IER5LQ5T953 404 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 ZNF341Q9BYN7 854 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 ZNF70Q9UC06 446 aaPredicted RBP8.73□□□□□ -1.01
CSTF3-201ENST00000323959 PCDHA11Q9Y5I1 949 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 PNMA3Q9UL41 463 aa8.73□□□□□ -1.01
CSTF3-201ENST00000323959 KBTBD13C9JR72 458 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 MAP2K5Q13163 448 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 ADSSL1Q8N142 457 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 RMDN1Q96DB5 314 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 PRMT6Q96LA8 375 aaPredicted RBP8.72□□□□□ -1.01
CSTF3-201ENST00000323959 FSD1Q9BTV5 496 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 DDX20Q9UHI6 824 aaKnown RBP8.72□□□□□ -1.01
CSTF3-201ENST00000323959 A0A0G2JLL6 359 aaPredicted RBP8.72□□□□□ -1.01
CSTF3-201ENST00000323959 PRRT2Q7Z6L0 340 aaPredicted RBP8.72□□□□□ -1.01
CSTF3-201ENST00000323959 NGEFQ8N5V2 710 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 ANKS1AQ92625 1134 aa8.72□□□□□ -1.01
CSTF3-201ENST00000323959 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
CSTF3-201ENST00000323959 AOX1Q06278 1338 aa8.71□□□□□ -1.01
CSTF3-201ENST00000323959 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.01
CSTF3-201ENST00000323959 TMEM240Q5SV17 173 aa8.71□□□□□ -1.01
CSTF3-201ENST00000323959 PPP2R2DQ66LE6 453 aa8.71□□□□□ -1.01
CSTF3-201ENST00000323959 SMCR8Q8TEV9 937 aaPredicted RBP8.71□□□□□ -1.01
CSTF3-201ENST00000323959 EDAQ92838 391 aa8.71□□□□□ -1.01
CSTF3-201ENST00000323959 DOCK3Q8IZD9 2030 aa8.71□□□□□ -1.02
CSTF3-201ENST00000323959 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.71□□□□□ -1.02
CSTF3-201ENST00000323959 TMEM221A6NGB7 291 aa8.71□□□□□ -1.02
CSTF3-201ENST00000323959 M0R296 226 aa8.71□□□□□ -1.02
CSTF3-201ENST00000323959 YBX2Q9Y2T7 364 aaKnown RBP8.71□□□□□ -1.02
CSTF3-201ENST00000323959 GRXCR2A6NFK2 248 aa8.7□□□□□ -1.02
CSTF3-201ENST00000323959 TDRD7Q8NHU6 1098 aaKnown RBP8.7□□□□□ -1.02
CSTF3-201ENST00000323959 NKD2Q969F2 451 aaPredicted RBP8.7□□□□□ -1.02
CSTF3-201ENST00000323959 NUDT12Q9BQG2 462 aa8.7□□□□□ -1.02
CSTF3-201ENST00000323959 UBE2ZQ9H832 354 aaPredicted RBP8.7□□□□□ -1.02
CSTF3-201ENST00000323959 UTYO14607 1347 aa8.7□□□□□ -1.02
CSTF3-201ENST00000323959 SOWAHBA6NEL2 793 aa8.7□□□□□ -1.02
CSTF3-201ENST00000323959 SPINK5Q9NQ38 1064 aaPredicted RBP8.7□□□□□ -1.02
CSTF3-201ENST00000323959 ZNF112Q9UJU3 913 aa8.7□□□□□ -1.02
CSTF3-201ENST00000323959 GRXCR1A8MXD5 290 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 TLE2Q04725 743 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 DLL3Q9NYJ7 618 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 RGS2P41220 211 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 PBXIP1Q96AQ6 731 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 DAGLAQ9Y4D2 1042 aa8.69□□□□□ -1.02
CSTF3-201ENST00000323959 COL4A4P53420 1690 aaPredicted RBP8.69□□□□□ -1.02
CSTF3-201ENST00000323959 SDHBP21912 280 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 MFSD14CQ5VZR4 134 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 PTCRAQ6ISU1 281 aaPredicted RBP8.68□□□□□ -1.02
CSTF3-201ENST00000323959 USP6NLQ92738 828 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
CSTF3-201ENST00000323959 MORF4L1Q9UBU8 362 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 RRP7AQ9Y3A4 280 aaKnown RBP8.68□□□□□ -1.02
CSTF3-201ENST00000323959 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 PHIPQ8WWQ0 1821 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
CSTF3-201ENST00000323959 TIMP1P01033 207 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 ZP2Q05996 745 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 FKBP1CQ5VVH2 108 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 MFSD5Q6N075 450 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 TOX2Q96NM4 488 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 APBA2Q99767 749 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 SERPINA10Q9UK55 444 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 PTPRFP10586 1907 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 ZNF536O15090 1300 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 CHD6Q8TD26 2715 aa8.68□□□□□ -1.02
CSTF3-201ENST00000323959 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
CSTF3-201ENST00000323959 GTF2IP78347 998 aa8.67□□□□□ -1.02
CSTF3-201ENST00000323959 TRIM67Q6ZTA4 783 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms