RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FBXO2Q9UK22 296 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-201ENST00000322507 KDM4AO75164 1064 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 SAAL1Q96ER3 474 aa10.83□□□□□ -0.68
COL12A1-201ENST00000322507 ATP6V1E1P36543 226 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 RTN1Q16799 776 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
COL12A1-201ENST00000322507 WDR70Q9NW82 654 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 SESN1Q9Y6P5 492 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 ZMYM3Q14202 1370 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 ZSCAN23Q3MJ62 389 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 BAG1Q99933 345 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-201ENST00000322507 TRIM8Q9BZR9 551 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 NYXQ9GZU5 481 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 BABAM1Q9NWV8 329 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 TNNC1P63316 161 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 FERMT3Q86UX7 667 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 MAK16Q9BXY0 300 aaKnown RBP10.82□□□□□ -0.68
COL12A1-201ENST00000322507 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 UGGT2Q9NYU1 1516 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 MCMDC2Q4G0Z9 681 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 HS2ST1Q7LGA3 356 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 CADPS2Q86UW7 1296 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 TRIM6Q9C030 488 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-201ENST00000322507 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-201ENST00000322507 TRPM2O94759 1503 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 MYD88Q99836 296 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 MIS12Q9H081 205 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 INSRP06213 1382 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 PRPF4BQ13523 1007 aaKnown RBP10.82□□□□□ -0.68
COL12A1-201ENST00000322507 TXNDC16Q9P2K2 825 aa10.82□□□□□ -0.68
COL12A1-201ENST00000322507 ZEB2O60315 1214 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 AOX1Q06278 1338 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 NUDCD3Q8IVD9 361 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 RHOBTB1O94844 696 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 EFHD2Q96C19 240 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-201ENST00000322507 C11orf95C9JLR9 678 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-201ENST00000322507 NUTM2AQ8IVF1 878 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-201ENST00000322507 ARMC2Q8NEN0 867 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 PIK3C2GO75747 1445 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 SEPT2Q15019 361 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 CCDC42Q96M95 316 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 PHBP35232 272 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 PRKG1Q13976 671 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 LLPHQ9BRT6 129 aaKnown RBP10.81□□□□□ -0.68
COL12A1-201ENST00000322507 MAST1Q9Y2H9 1570 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 CKAP2LQ8IYA6 745 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 CCDC26Q8TAB7 109 aa10.81□□□□□ -0.68
COL12A1-201ENST00000322507 PPP2R5EQ16537 467 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 ZFYVE1Q9HBF4 777 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 SAMM50Q9Y512 469 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 SPDYE3A6NKU9 549 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 C16orf87Q6PH81 154 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 N4BP2L2Q92802 583 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-201ENST00000322507 KIFAP3Q92845 792 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 ARHGEF2Q92974 986 aaKnown RBP10.8□□□□□ -0.68
COL12A1-201ENST00000322507 RTL1A6NKG5 1358 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 HOXA7P31268 230 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-201ENST00000322507 USP33Q8TEY7 942 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 RRP36Q96EU6 259 aaKnown RBP10.8□□□□□ -0.68
COL12A1-201ENST00000322507 IDEP14735 1019 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 BBOF1Q8ND07 529 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 CNGB3Q9NQW8 809 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 POLR3AO14802 1390 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-201ENST00000322507 MCM10Q7L590 875 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 CABS1Q96KC9 395 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 TSC22D4Q9Y3Q8 395 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 RANBP1P43487 201 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 VPS52Q8N1B4 723 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 ZKSCAN5Q9Y2L8 839 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 DNMT1P26358 1616 aaKnown RBP10.8□□□□□ -0.68
COL12A1-201ENST00000322507 LDHAL6AQ6ZMR3 332 aa10.8□□□□□ -0.68
COL12A1-201ENST00000322507 TRIM75PA6NK02 468 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ZSCAN26Q16670 478 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ARHGAP18Q8N392 663 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 NEK11Q8NG66 645 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 MAP3K2Q9Y2U5 619 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ZC3H6P61129 1189 aaKnown RBP10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ICE2Q659A1 982 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 PDXDC1Q6P996 788 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 NME8Q8N427 588 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 UBAP1Q9NZ09 502 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 PBRM1Q86U86 1689 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ATG3Q9NT62 314 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 TMOD4Q9NZQ9 345 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ISM2Q6H9L7 571 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ZNF804AQ7Z570 1209 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 TSKSQ9UJT2 592 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 TRIM68Q6AZZ1 485 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 SLC38A10Q9HBR0 1119 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ERCC5P28715 1186 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-201ENST00000322507 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 IQUBQ8NA54 791 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 FLCNQ8NFG4 579 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 CCDC124Q96CT7 223 aaKnown RBP10.79□□□□□ -0.68
COL12A1-201ENST00000322507 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
COL12A1-201ENST00000322507 SYT1P21579 422 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 GOLGA6CA6NDK9 693 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms