RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 SREBF2Q12772 1141 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 TMED8Q6PL24 325 aaPredicted RBP17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 MAGEB6Q8N7X4 407 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 DDX4Q9NQI0 724 aaKnown RBP17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 GOLIM4O00461 696 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 VGLL4Q14135 290 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 SH3RF3Q8TEJ3 882 aaPredicted RBP17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 GPATCH3Q96I76 525 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 BOLA2Q9H3K6 86 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 PRDM10Q9NQV6 1147 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
TUBA3D-201ENST00000321253 DOCK2Q92608 1830 aa17.81■□□□□ 0.44
TUBA3D-201ENST00000321253 PPP4CP60510 307 aa17.81■□□□□ 0.44
TUBA3D-201ENST00000321253 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
TUBA3D-201ENST00000321253 OPTNQ96CV9 577 aa17.81■□□□□ 0.44
TUBA3D-201ENST00000321253 SAGE1Q9NXZ1 904 aa17.81■□□□□ 0.44
TUBA3D-201ENST00000321253 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
TUBA3D-201ENST00000321253 MANSC4A6NHS7 340 aaPredicted RBP17.8■□□□□ 0.44
TUBA3D-201ENST00000321253 COL13A1Q5TAT6 717 aaPredicted RBP17.8■□□□□ 0.44
TUBA3D-201ENST00000321253 CERS3Q8IU89 383 aa17.8■□□□□ 0.44
TUBA3D-201ENST00000321253 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
TUBA3D-201ENST00000321253 PAG1Q9NWQ8 432 aa17.8■□□□□ 0.44
TUBA3D-201ENST00000321253 RNF186Q9NXI6 227 aa17.8■□□□□ 0.44
TUBA3D-201ENST00000321253 DDTLA6NHG4 134 aaPredicted RBP17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 TRPA1O75762 1119 aa17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 IFFO2Q5TF58 517 aa17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 SH3BP5LQ7L8J4 393 aa17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 HAUS7Q99871 368 aa17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
TUBA3D-201ENST00000321253 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
TUBA3D-201ENST00000321253 TM4SF4P48230 202 aa17.78■□□□□ 0.44
TUBA3D-201ENST00000321253 INHBEP58166 350 aa17.78■□□□□ 0.44
TUBA3D-201ENST00000321253 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
TUBA3D-201ENST00000321253 PDE6AP16499 860 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 INPP5BP32019 993 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 DYNLL1P63167 89 aaKnown RBP17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 ERO1BQ86YB8 467 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 EXOC6Q8TAG9 804 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 TGFBRAP1Q8WUH2 860 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 GCC1Q96CN9 775 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 EDC3Q96F86 508 aaKnown RBP17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 SNCAIPQ9Y6H5 919 aa17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 COL2A1P02458 1487 aaPredicted RBP17.77■□□□□ 0.44
TUBA3D-201ENST00000321253 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.43
TUBA3D-201ENST00000321253 GJA5P36382 358 aa17.77■□□□□ 0.43
TUBA3D-201ENST00000321253 MAPKAPK5Q8IW41 473 aa17.77■□□□□ 0.43
TUBA3D-201ENST00000321253 FLT1P17948 1338 aa17.76■□□□□ 0.43
TUBA3D-201ENST00000321253 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
TUBA3D-201ENST00000321253 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
TUBA3D-201ENST00000321253 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
TUBA3D-201ENST00000321253 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
TUBA3D-201ENST00000321253 MAGEB6P1A0A0J9YX57 407 aa17.75■□□□□ 0.43
TUBA3D-201ENST00000321253 ALDH1A1P00352 501 aa17.75■□□□□ 0.43
TUBA3D-201ENST00000321253 USP5P45974 858 aa17.75■□□□□ 0.43
TUBA3D-201ENST00000321253 GTF2A2P52657 109 aa17.75■□□□□ 0.43
TUBA3D-201ENST00000321253 OTUD7BQ6GQQ9 843 aa17.75■□□□□ 0.43
TUBA3D-201ENST00000321253 ZNF532Q9HCE3 1301 aa17.75■□□□□ 0.43
TUBA3D-201ENST00000321253 TBC1D12O60347 775 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 NOL9Q5SY16 702 aaKnown RBP17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 IFNL1Q8IU54 200 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 TNS4Q8IZW8 715 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 PICK1Q9NRD5 415 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 PI4KBQ9UBF8 816 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 TTC41PQ6P2S7 1318 aa17.74■□□□□ 0.43
TUBA3D-201ENST00000321253 LAMB1P07942 1786 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 FOCADQ5VW36 1801 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 ERC2O15083 957 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 PPATQ06203 517 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 PPIL2Q13356 520 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 ZSCAN25Q6NSZ9 544 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 CDK5RAP2Q96SN8 1893 aa17.73■□□□□ 0.43
TUBA3D-201ENST00000321253 TCRBV5S4A2TA0A5A2 114 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 ADD2P35612 726 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 SCYL3Q8IZE3 742 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 TRIM34Q9BYJ4 488 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 CRNKL1Q9BZJ0 848 aaKnown RBP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 HERC5Q9UII4 1024 aaKnown RBP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 CCL15-CCL14A0A0B4J2E2 113 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 TESPA1A2RU30 521 aaPredicted RBP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 IGF2BP3O00425 579 aaKnown RBP eCLIP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 IRF6O14896 467 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 CTNND1O60716 968 aaKnown RBP17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 TBC1D8O95759 1140 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 HLA-DOAP06340 250 aa17.72■□□□□ 0.43
TUBA3D-201ENST00000321253 SLURP2P0DP57 97 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms