RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 MAP4K4O95819 1239 aaPredicted RBP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 NOM1Q5C9Z4 860 aaKnown RBP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 ZKSCAN4Q969J2 545 aaPredicted RBP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 PIH1D3Q9NQM4 214 aaKnown RBP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 MAST2Q6P0Q8 1798 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 INPP5BP32019 993 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 NAA16Q6N069 864 aaPredicted RBP12.15□□□□□ -0.46
CCDC65-202ENST00000320516 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 PTPN18Q99952 460 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 R3HDMLQ9H3Y0 253 aa12.15□□□□□ -0.46
CCDC65-202ENST00000320516 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
CCDC65-202ENST00000320516 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
CCDC65-202ENST00000320516 PPP4CP60510 307 aa12.14□□□□□ -0.47
CCDC65-202ENST00000320516 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
CCDC65-202ENST00000320516 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
CCDC65-202ENST00000320516 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 COL2A1P02458 1487 aaPredicted RBP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 PHF20L1A8MW92 1017 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 APBB1O00213 710 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 PICALMQ13492 652 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 ZNF296Q8WUU4 475 aaPredicted RBP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 BRI3BPQ8WY22 251 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 ANTXR1Q9H6X2 564 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 GPR25O00155 361 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 GTF2A2P52657 109 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 PPIL2Q13356 520 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 NOL9Q5SY16 702 aaKnown RBP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
CCDC65-202ENST00000320516 AATFQ9NY61 560 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC65-202ENST00000320516 IRF6O14896 467 aa12.12□□□□□ -0.47
CCDC65-202ENST00000320516 PPATQ06203 517 aa12.12□□□□□ -0.47
CCDC65-202ENST00000320516 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
CCDC65-202ENST00000320516 ZSCAN29Q8IWY8 852 aaPredicted RBP12.12□□□□□ -0.47
CCDC65-202ENST00000320516 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
CCDC65-202ENST00000320516 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
CCDC65-202ENST00000320516 CCL15-CCL14A0A0B4J2E2 113 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 TBC1D12O60347 775 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 CAPN15O75808 1086 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
CCDC65-202ENST00000320516 BAG3O95817 575 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
CCDC65-202ENST00000320516 DGKZQ13574 1117 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 CCL15Q16663 113 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
CCDC65-202ENST00000320516 PLCG2P16885 1265 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 CYP7A1P22680 504 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
CCDC65-202ENST00000320516 NOL10Q9BSC4 688 aaKnown RBP12.1□□□□□ -0.47
CCDC65-202ENST00000320516 LRRCC1Q9C099 1032 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 CETPP11597 493 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 MAP3K12Q12852 859 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 CRHR2Q13324 411 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 SNAPC2Q13487 334 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 CTU1Q7Z7A3 348 aaKnown RBP12.1□□□□□ -0.47
CCDC65-202ENST00000320516 SCYL3Q8IZE3 742 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 MAGEB6Q8N7X4 407 aa12.1□□□□□ -0.47
CCDC65-202ENST00000320516 CDK5RAP2Q96SN8 1893 aa12.09□□□□□ -0.47
CCDC65-202ENST00000320516 FKTNO75072 461 aa12.09□□□□□ -0.47
CCDC65-202ENST00000320516 FLT1P17948 1338 aa12.09□□□□□ -0.47
CCDC65-202ENST00000320516 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
CCDC65-202ENST00000320516 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
CCDC65-202ENST00000320516 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
CCDC65-202ENST00000320516 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
CCDC65-202ENST00000320516 SIPA1L1O43166 1804 aa12.08□□□□□ -0.47
CCDC65-202ENST00000320516 BTBD19C9JJ37 291 aa12.08□□□□□ -0.48
CCDC65-202ENST00000320516 SMARCA5O60264 1052 aaPredicted RBP12.08□□□□□ -0.48
CCDC65-202ENST00000320516 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
CCDC65-202ENST00000320516 ATP5JP18859 108 aa12.08□□□□□ -0.48
CCDC65-202ENST00000320516 MOGSQ13724 837 aa12.08□□□□□ -0.48
CCDC65-202ENST00000320516 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
CCDC65-202ENST00000320516 ZCCHC17Q9NP64 241 aaKnown RBP12.08□□□□□ -0.48
CCDC65-202ENST00000320516 FAM196BA6NMK8 535 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 GOLIM4O00461 696 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 PTPRAP18433 802 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 RRP1BQ14684 758 aaKnown RBP12.07□□□□□ -0.48
CCDC65-202ENST00000320516 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
CCDC65-202ENST00000320516 CERS3Q8IU89 383 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 EDC3Q96F86 508 aaKnown RBP12.07□□□□□ -0.48
CCDC65-202ENST00000320516 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
CCDC65-202ENST00000320516 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
CCDC65-202ENST00000320516 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
CCDC65-202ENST00000320516 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
CCDC65-202ENST00000320516 BOLA2Q9H3K6 86 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms