RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 CTAGE4Q8IX94 777 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
SCAP-202ENST00000320017 FANCLQ9NW38 375 aa17.09■□□□□ 0.33
SCAP-202ENST00000320017 KSR2Q6VAB6 950 aa17.08■□□□□ 0.33
SCAP-202ENST00000320017 IGSF22Q8N9C0 903 aa17.08■□□□□ 0.33
SCAP-202ENST00000320017 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.33
SCAP-202ENST00000320017 RPS6KB1P23443 525 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 TFCP2Q12800 502 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 CABS1Q96KC9 395 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 XRN1Q8IZH2 1706 aaKnown RBP17.08■□□□□ 0.32
SCAP-202ENST00000320017 PPP1R12AO14974 1030 aaPredicted RBP17.08■□□□□ 0.32
SCAP-202ENST00000320017 MTF1Q14872 753 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 RNF187Q5TA31 235 aaPredicted RBP17.08■□□□□ 0.32
SCAP-202ENST00000320017 KIRREL3Q8IZU9 778 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 OTUD6BQ8N6M0 293 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 HINFPQ9BQA5 517 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 SNRKQ9NRH2 765 aa17.08■□□□□ 0.32
SCAP-202ENST00000320017 AOX1Q06278 1338 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
SCAP-202ENST00000320017 SSBP05455 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCAP-202ENST00000320017 ACTN3Q08043 901 aaPredicted RBP17.07■□□□□ 0.32
SCAP-202ENST00000320017 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
SCAP-202ENST00000320017 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 FAM76AQ8TAV0 307 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 CALR3Q96L12 384 aaKnown RBP17.07■□□□□ 0.32
SCAP-202ENST00000320017 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 ODF2LQ9ULJ1 636 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 PCDHA7Q9UN72 937 aa17.07■□□□□ 0.32
SCAP-202ENST00000320017 NALCNQ8IZF0 1738 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 HAND2P61296 217 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
SCAP-202ENST00000320017 TOB2Q14106 344 aaPredicted RBP17.06■□□□□ 0.32
SCAP-202ENST00000320017 PRPF38AQ8NAV1 312 aaKnown RBP17.06■□□□□ 0.32
SCAP-202ENST00000320017 KAZALD1Q96I82 304 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 DBNDD2Q9BQY9 259 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 ZMYND10O75800 440 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 KIFC2Q96AC6 838 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 MRPL44Q9H9J2 332 aaKnown RBP17.06■□□□□ 0.32
SCAP-202ENST00000320017 CYP27B1O15528 508 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 TIMM10P62072 90 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 CDC23Q9UJX2 597 aa17.06■□□□□ 0.32
SCAP-202ENST00000320017 CLNS1AP54105 237 aaKnown RBP17.05■□□□□ 0.32
SCAP-202ENST00000320017 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 CCDC175P0C221 793 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 PHKG2P15735 406 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 NLRP12P59046 1061 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 GNGT1P63211 74 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 ENGASEQ8NFI3 743 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 MAP4K1Q92918 833 aa17.05■□□□□ 0.32
SCAP-202ENST00000320017 GOLGA6CA6NDK9 693 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 GOLGA6DP0CG33 693 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 HNRNPLLQ8WVV9 542 aaKnown RBP17.04■□□□□ 0.32
SCAP-202ENST00000320017 GPHNQ9NQX3 736 aaPredicted RBP17.04■□□□□ 0.32
SCAP-202ENST00000320017 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 GOLGA6AQ9NYA3 693 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 PXDNQ92626 1479 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 MYL5Q02045 173 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 NAA25Q14CX7 972 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 GSPT2Q8IYD1 628 aaKnown RBP17.04■□□□□ 0.32
SCAP-202ENST00000320017 MIEF2Q96C03 454 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
SCAP-202ENST00000320017 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.04■□□□□ 0.32
SCAP-202ENST00000320017 PPARDQ03181 441 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 A0A0U1RQJ8 604 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 CTAGE9A4FU28 777 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 SOWAHDA6NJG2 315 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
SCAP-202ENST00000320017 IGKV5-2P06315 115 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 NCAPHQ15003 741 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 MAP9Q49MG5 647 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 FCHSD1Q86WN1 690 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
SCAP-202ENST00000320017 ATRIPQ8WXE1 791 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 POLD4Q9HCU8 107 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 ADAMTSL3P82987 1691 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 TOPAZ1Q8N9V7 1692 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 NDUFAB1O14561 156 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 CDR1P51861 262 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 STIM1Q13586 685 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 CEP120Q8N960 986 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 NOA1Q8NC60 698 aaKnown RBP17.03■□□□□ 0.32
SCAP-202ENST00000320017 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
SCAP-202ENST00000320017 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
SCAP-202ENST00000320017 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.32
SCAP-202ENST00000320017 SKAP2O75563 359 aaPredicted RBP17.02■□□□□ 0.32
SCAP-202ENST00000320017 PEX19P40855 299 aa17.02■□□□□ 0.32
SCAP-202ENST00000320017 ZNF594Q96JF6 807 aaPredicted RBP17.02■□□□□ 0.32
SCAP-202ENST00000320017 MST1RQ04912 1400 aa17.02■□□□□ 0.32
SCAP-202ENST00000320017 LONRF3Q496Y0 759 aa17.02■□□□□ 0.32
SCAP-202ENST00000320017 ZBTB3Q9H5J0 574 aa17.02■□□□□ 0.32
SCAP-202ENST00000320017 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
SCAP-202ENST00000320017 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
SCAP-202ENST00000320017 A0A087WZG4 1122 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms