RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CCDC158Q5M9N0 1113 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 BLZF1Q9H2G9 400 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 L2HGDHQ9H9P8 463 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 BAZ2BQ9UIF8 2168 aaKnown RBP16.24■□□□□ 0.19
PABPC1-201ENST00000318607 EFCAB8A8MWE9 144 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 RNF113AO15541 343 aaKnown RBP16.24■□□□□ 0.19
PABPC1-201ENST00000318607 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-201ENST00000318607 HAUS7Q99871 368 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 MED23Q9ULK4 1368 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 SRGAP2O75044 1071 aa16.23■□□□□ 0.19
PABPC1-201ENST00000318607 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
PABPC1-201ENST00000318607 CWC15Q9P013 229 aaKnown RBP16.23■□□□□ 0.19
PABPC1-201ENST00000318607 RRP15Q9Y3B9 282 aaKnown RBP16.23■□□□□ 0.19
PABPC1-201ENST00000318607 KIF20BQ96Q89 1820 aa16.23■□□□□ 0.19
PABPC1-201ENST00000318607 KDRP35968 1356 aa16.23■□□□□ 0.19
PABPC1-201ENST00000318607 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
PABPC1-201ENST00000318607 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
PABPC1-201ENST00000318607 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
PABPC1-201ENST00000318607 ZNF526Q8TF50 670 aaPredicted RBP16.23■□□□□ 0.19
PABPC1-201ENST00000318607 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
PABPC1-201ENST00000318607 IFIT3O14879 490 aaKnown RBP16.22■□□□□ 0.19
PABPC1-201ENST00000318607 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 KCNB2Q92953 911 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 IP6K1Q92551 441 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 FAM107BQ9H098 131 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 TRIM10Q9UDY6 481 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 ARHGAP6O43182 974 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 GCP02774 474 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 GTF2A1P52655 376 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-201ENST00000318607 LLPHQ9BRT6 129 aaKnown RBP16.22■□□□□ 0.19
PABPC1-201ENST00000318607 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-201ENST00000318607 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
PABPC1-201ENST00000318607 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 METTL16Q86W50 562 aaKnown RBP16.21■□□□□ 0.19
PABPC1-201ENST00000318607 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-201ENST00000318607 SLC35F6Q8N357 371 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 PNKPQ96T60 521 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 HDAC6Q9UBN7 1215 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 GPAA1O43292 621 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 CCP110O43303 1012 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 ZPR1O75312 459 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 CABP4P57796 275 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
PABPC1-201ENST00000318607 VSTM4Q8IW00 320 aa16.21■□□□□ 0.19
PABPC1-201ENST00000318607 PRDM1O75626 825 aa16.21■□□□□ 0.18
PABPC1-201ENST00000318607 CCDC175P0C221 793 aa16.21■□□□□ 0.18
PABPC1-201ENST00000318607 GUCY1A2P33402 732 aa16.21■□□□□ 0.18
PABPC1-201ENST00000318607 RBL2Q08999 1139 aa16.21■□□□□ 0.18
PABPC1-201ENST00000318607 MICALL1Q8N3F8 863 aa16.21■□□□□ 0.18
PABPC1-201ENST00000318607 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
PABPC1-201ENST00000318607 CASP14P31944 242 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 CCDC93Q567U6 631 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 SPECC1LQ69YQ0 1117 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 FAM205CA6NFA0 338 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 N4BP3O15049 544 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 CMA1P23946 247 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
PABPC1-201ENST00000318607 ENOX2Q16206 610 aaKnown RBP16.2■□□□□ 0.18
PABPC1-201ENST00000318607 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
PABPC1-201ENST00000318607 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
PABPC1-201ENST00000318607 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
PABPC1-201ENST00000318607 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 INTS13Q9NVM9 706 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 ZBTB43O43298 467 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
PABPC1-201ENST00000318607 BMP6P22004 513 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 VSNL1P62760 191 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 IL17RAQ96F46 866 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
PABPC1-201ENST00000318607 ABCC6O95255 1503 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
PABPC1-201ENST00000318607 EPSTI1Q96J88 318 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 FUT8Q9BYC5 575 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 SLC12A7Q9Y666 1083 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 SLC39A14Q15043 492 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 NOA1Q8NC60 698 aaKnown RBP16.18■□□□□ 0.18
PABPC1-201ENST00000318607 LIG3P49916 1009 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 PDIA6Q15084 440 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 USPL1Q5W0Q7 1092 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 RAD9BQ6WBX8 426 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 XAGE2Q96GT9 111 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 PCDHB6Q9Y5E3 794 aa16.18■□□□□ 0.18
PABPC1-201ENST00000318607 AKR1B15C9JRZ8 316 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-201ENST00000318607 POSTNQ15063 836 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 CYB5R4Q7L1T6 521 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 FAM204AQ9H8W3 233 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 TXLNAP40222 546 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 RNASE9P60153 205 aaKnown RBP16.17■□□□□ 0.18
PABPC1-201ENST00000318607 IRX3P78415 501 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-201ENST00000318607 ZNF174Q15697 407 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms