RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 XDHP47989 1333 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 BBOX1O75936 387 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 LRRC8AQ8IWT6 810 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 MYO5AQ9Y4I1 1855 aaKnown RBP18.49■□□□□ 0.55
USH1C-202ENST00000318024 GABPB1Q06547 395 aaPredicted RBP18.49■□□□□ 0.55
USH1C-202ENST00000318024 DRC7Q8IY82 874 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 MRFAP1L1Q96HT8 127 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 DENND2AQ9ULE3 1009 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 UFL1O94874 794 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 FGAP02671 866 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 APPP05067 770 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
USH1C-202ENST00000318024 HAND2P61296 217 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 MIGA1Q8NAN2 632 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 CCDC112Q8NEF3 446 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 AIDAQ96BJ3 306 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 KCND1Q9NSA2 647 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
USH1C-202ENST00000318024 KIF18AQ8NI77 898 aa18.48■□□□□ 0.55
USH1C-202ENST00000318024 GTF3C6Q969F1 213 aa18.48■□□□□ 0.55
USH1C-202ENST00000318024 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.55
USH1C-202ENST00000318024 GOLGA6L4A6NEF3 574 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 STOX1Q6ZVD7 989 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 ADGRA1Q86SQ6 560 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 ARMT1Q9H993 441 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 POLLQ9UGP5 575 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 IRS2Q9Y4H2 1338 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 USP27XA6NNY8 438 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 PPEF1O14829 653 aaPredicted RBP18.47■□□□□ 0.55
USH1C-202ENST00000318024 JAK2O60674 1132 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 SLFN14P0C7P3 912 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 PDE6BP35913 854 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 CEP135Q66GS9 1140 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 C11orf57Q6ZUT1 292 aaPredicted RBP18.47■□□□□ 0.55
USH1C-202ENST00000318024 GGA1Q9UJY5 639 aa18.47■□□□□ 0.55
USH1C-202ENST00000318024 NEMFO60524 1076 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 MBD4O95243 580 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 ARID5BQ14865 1188 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 TPD52L1Q16890 204 aaPredicted RBP18.46■□□□□ 0.55
USH1C-202ENST00000318024 NEK1Q96PY6 1258 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 C6orf229H3BNL8 230 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 IGSF3O75054 1194 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 NPR1P16066 1061 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 CYP7A1P22680 504 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 CCZ1BP86790 482 aa18.46■□□□□ 0.55
USH1C-202ENST00000318024 CCZ1P86791 482 aaPredicted RBP18.46■□□□□ 0.55
USH1C-202ENST00000318024 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
USH1C-202ENST00000318024 BICD2Q8TD16 824 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 BRF1Q92994 677 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 LRRC2Q9BYS8 371 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 PRKAB2O43741 272 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 PRDX5P30044 214 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 CHRNA5P30532 468 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 LCORLQ8N3X6 602 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
USH1C-202ENST00000318024 ZSCAN16Q9H4T2 348 aaPredicted RBP18.45■□□□□ 0.54
USH1C-202ENST00000318024 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
USH1C-202ENST00000318024 RGPD3A6NKT7 1758 aaPredicted RBP18.44■□□□□ 0.54
USH1C-202ENST00000318024 RGPD4Q7Z3J3 1758 aa18.44■□□□□ 0.54
USH1C-202ENST00000318024 E7EWF7 191 aa18.44■□□□□ 0.54
USH1C-202ENST00000318024 KRT32Q14532 448 aa18.44■□□□□ 0.54
USH1C-202ENST00000318024 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
USH1C-202ENST00000318024 ZNF384Q8TF68 577 aa18.44■□□□□ 0.54
USH1C-202ENST00000318024 RCOR1Q9UKL0 485 aa18.44■□□□□ 0.54
USH1C-202ENST00000318024 RIMBP2O15034 1052 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 ATP2B4P23634 1241 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 STK3Q13188 491 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 SNW1Q13573 536 aaKnown RBP18.43■□□□□ 0.54
USH1C-202ENST00000318024 KMT5BQ4FZB7 885 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 CHST3Q7LGC8 479 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 DHX40Q8IX18 779 aaKnown RBP18.43■□□□□ 0.54
USH1C-202ENST00000318024 SP8Q8IXZ3 490 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 ATP6V0A2Q9Y487 856 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 SEMA3EO15041 775 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
USH1C-202ENST00000318024 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
USH1C-202ENST00000318024 IMMTQ16891 758 aaKnown RBP18.42■□□□□ 0.54
USH1C-202ENST00000318024 ZNF804AQ7Z570 1209 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 ZNF397Q8NF99 534 aaPredicted RBP18.42■□□□□ 0.54
USH1C-202ENST00000318024 ENGASEQ8NFI3 743 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 GOLPH3LQ9H4A5 285 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 ZNF213O14771 459 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 CTAGE5O15320 804 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 MECOMQ03112 1051 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 STX1AQ16623 288 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
USH1C-202ENST00000318024 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
USH1C-202ENST00000318024 H0YIN7 160 aa18.41■□□□□ 0.54
USH1C-202ENST00000318024 LAMA4Q16363 1823 aa18.41■□□□□ 0.54
USH1C-202ENST00000318024 CD209Q9NNX6 404 aa18.41■□□□□ 0.54
USH1C-202ENST00000318024 MYH7P12883 1935 aa18.41■□□□□ 0.54
USH1C-202ENST00000318024 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
USH1C-202ENST00000318024 SKILP12757 684 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms