RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MORC3Q14149 939 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ZNF569Q5MCW4 686 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 MB21D2Q8IYB1 491 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-201ENST00000316707 AMOTL2Q9Y2J4 779 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 EYA2O00167 538 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 POSTNQ15063 836 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 B4GALNT4Q76KP1 1039 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 LGR6Q9HBX8 967 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 DIP2AQ14689 1571 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 STK36Q9NRP7 1315 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ZNF609O15014 1411 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 KIF20BQ96Q89 1820 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 XBP1P17861 261 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ATP6V1AP38606 617 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ARHGAP25P42331 645 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 METAP2P50579 478 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 PTPAQ15257 358 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 WASHC4Q2M389 1173 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 CYP26C1Q6V0L0 522 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 HSD3B7Q9H2F3 369 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 MAST3O60307 1309 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ZNF213O14771 459 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 MARCKSP29966 332 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 AIMP1Q12904 312 aaKnown RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 NR1I3Q14994 352 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 OTUD7BQ6GQQ9 843 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 FNBP4Q8N3X1 1017 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 APPBP2Q92624 585 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 LZTFL1Q9NQ48 299 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 MFAP3LO75121 409 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ITIH3Q06033 890 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 METTL16Q86W50 562 aaKnown RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 AMOTL1Q8IY63 956 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 COG1Q8WTW3 980 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 SYTL4Q96C24 671 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 FAM204AQ9H8W3 233 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ANKZF1Q9H8Y5 726 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ADAMTS13Q76LX8 1427 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 A0A087WWV3 80 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 A0A087WZG4 1122 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 LRRC10BA6NIK2 292 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 CIAO1O76071 339 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 KIAA0754O94854 1291 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 LIFRP42702 1097 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 SART3Q15020 963 aaKnown RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 NBPF6Q5VWK0 638 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 CCDC129Q6ZRS4 1044 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 TTC5Q8N0Z6 440 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 TMTC2Q8N394 836 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 NBPF4Q96M43 638 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 SRRM3A6NNA2 597 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 KRT86O43790 486 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 USP14P54578 494 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 SHC4Q6S5L8 630 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 UBE3BQ7Z3V4 1068 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 NOSTRINQ8IVI9 506 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 XAGE3Q8WTP9 111 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 ZSWIM4Q9H7M6 989 aa5.42□□□□□ -1.54
PTPN13-201ENST00000316707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN13-201ENST00000316707 SNRPA1P09661 255 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 CALRP27797 417 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 KARSQ15046 597 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 MPRIPQ6WCQ1 1025 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 ARFGAP2Q8N6H7 521 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 EDC3Q96F86 508 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 ZNHIT6Q9NWK9 470 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 ZMYM6O95789 1325 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 KIF1CO43896 1103 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 RNF40O75150 1001 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 IFNAR1P17181 557 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 LMBR1LQ6UX01 489 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 PUF60Q9UHX1 559 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 PHF8Q9UPP1 1060 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 N4BP3O15049 544 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 ZBTB43O43298 467 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 ERLIN2O94905 339 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 ADKP55263 362 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 STIM1Q13586 685 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 COL9A3Q14050 684 aaPredicted RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 TOGARAM2Q6ZUX3 1019 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 COPS6Q7L5N1 327 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 C14orf37Q86TY3 774 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 SGMS1Q86VZ5 419 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 SEC62Q99442 399 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 PSMD14O00487 310 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 SARSP49591 514 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 MNAT1P51948 309 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 PNOCQ13519 176 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 FERMT2Q96AC1 680 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 RUFY1Q96T51 708 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 MYD88Q99836 296 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 MRPL44Q9H9J2 332 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 A1CFQ9NQ94 594 aaKnown RBP5.41□□□□□ -1.54
PTPN13-201ENST00000316707 FAM184BQ9ULE4 1060 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 KCNQ3O43525 872 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 VSNL1P62760 191 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 TEX2Q8IWB9 1127 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 DESI2Q9BSY9 194 aa5.41□□□□□ -1.54
PTPN13-201ENST00000316707 FOXP1Q9H334 677 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms