RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 TRDNQ13061 729 aa18.55■□□□□ 0.56
CALR-201ENST00000316448 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
CALR-201ENST00000316448 IGDCC4Q8TDY8 1250 aa18.55■□□□□ 0.56
CALR-201ENST00000316448 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
CALR-201ENST00000316448 CHAMP1Q96JM3 812 aa18.55■□□□□ 0.56
CALR-201ENST00000316448 WDR19Q8NEZ3 1342 aa18.54■□□□□ 0.56
CALR-201ENST00000316448 POLD1P28340 1107 aa18.54■□□□□ 0.56
CALR-201ENST00000316448 PTGER2P43116 358 aa18.54■□□□□ 0.56
CALR-201ENST00000316448 TGFB2P61812 414 aa18.54■□□□□ 0.56
CALR-201ENST00000316448 RRP12Q5JTH9 1297 aaKnown RBP18.54■□□□□ 0.56
CALR-201ENST00000316448 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
CALR-201ENST00000316448 DAGLAQ9Y4D2 1042 aa18.54■□□□□ 0.56
CALR-201ENST00000316448 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 SH2B2O14492 632 aaPredicted RBP18.53■□□□□ 0.56
CALR-201ENST00000316448 JAK2O60674 1132 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 BAG3O95817 575 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
CALR-201ENST00000316448 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 CCDC93Q567U6 631 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 TGFBRAP1Q8WUH2 860 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 NCOA5Q9HCD5 579 aaKnown RBP18.53■□□□□ 0.56
CALR-201ENST00000316448 HPS5Q9UPZ3 1129 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 FGRP09769 529 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 SCNN1DP51172 638 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 RAB11FIP4Q86YS3 637 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 ZNF274Q96GC6 653 aaPredicted RBP18.53■□□□□ 0.56
CALR-201ENST00000316448 LMBRD1Q9NUN5 540 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 TTF2Q9UNY4 1162 aaKnown RBP18.53■□□□□ 0.56
CALR-201ENST00000316448 SUGT1Q9Y2Z0 365 aa18.53■□□□□ 0.56
CALR-201ENST00000316448 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.56
CALR-201ENST00000316448 SYT1P21579 422 aa18.52■□□□□ 0.56
CALR-201ENST00000316448 MAPKAPK5Q8IW41 473 aa18.52■□□□□ 0.56
CALR-201ENST00000316448 ZKSCAN3Q9BRR0 538 aa18.52■□□□□ 0.56
CALR-201ENST00000316448 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.56
CALR-201ENST00000316448 PIM2Q9P1W9 311 aa18.52■□□□□ 0.56
CALR-201ENST00000316448 PCDHAC2Q9Y5I4 1007 aa18.52■□□□□ 0.56
CALR-201ENST00000316448 COL4A5P29400 1685 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 PRDM1O75626 825 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 USP5P45974 858 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 KLHL40Q2TBA0 621 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 STRIP1Q5VSL9 837 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 KRT23Q9C075 422 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 CNNM2Q9H8M5 875 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 LY9Q9HBG7 655 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 ZNF277Q9NRM2 450 aaPredicted RBP18.51■□□□□ 0.55
CALR-201ENST00000316448 TOMM22Q9NS69 142 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 PPP1R1BQ9UD71 204 aaPredicted RBP18.51■□□□□ 0.55
CALR-201ENST00000316448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
CALR-201ENST00000316448 ZNF646O15015 1829 aaPredicted RBP18.51■□□□□ 0.55
CALR-201ENST00000316448 KLF18A0A0U1RQI7 1052 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 STX6O43752 255 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 C12orf60Q5U649 245 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 SUPT20HQ8NEM7 779 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 PSMD1Q99460 953 aa18.51■□□□□ 0.55
CALR-201ENST00000316448 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
CALR-201ENST00000316448 ANGEL1Q9UNK9 670 aaKnown RBP18.51■□□□□ 0.55
CALR-201ENST00000316448 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
CALR-201ENST00000316448 TEX11Q8IYF3 940 aa18.5■□□□□ 0.55
CALR-201ENST00000316448 RNF41Q9H4P4 317 aaPredicted RBP18.5■□□□□ 0.55
CALR-201ENST00000316448 USP17L3A6NCW0 530 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 USP17L4A6NCW7 530 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 USP17L1Q7RTZ2 530 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 KIAA0825Q8IV33 1275 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 NSUN7Q8NE18 718 aaKnown RBP18.49■□□□□ 0.55
CALR-201ENST00000316448 DYNLL2Q96FJ2 89 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 TMEM87BQ96K49 555 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
CALR-201ENST00000316448 SAP30BPQ9UHR5 308 aaKnown RBP18.49■□□□□ 0.55
CALR-201ENST00000316448 ADAMTSL1Q8N6G6 1762 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
CALR-201ENST00000316448 PLCD1P51178 756 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 TMEM67Q5HYA8 995 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 SLF2Q8IX21 1173 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 SMARCC2Q8TAQ2 1214 aa18.49■□□□□ 0.55
CALR-201ENST00000316448 GZF1Q9H116 711 aaPredicted RBP18.49■□□□□ 0.55
CALR-201ENST00000316448 ARPP21Q9UBL0 812 aaPredicted RBP18.49■□□□□ 0.55
CALR-201ENST00000316448 CDK5RAP2Q96SN8 1893 aa18.48■□□□□ 0.55
CALR-201ENST00000316448 FKBP1AP62942 108 aaKnown RBP18.48■□□□□ 0.55
CALR-201ENST00000316448 APOBEC3HQ6NTF7 200 aaKnown RBP18.48■□□□□ 0.55
CALR-201ENST00000316448 KLHL34Q8N239 644 aa18.48■□□□□ 0.55
CALR-201ENST00000316448 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
CALR-201ENST00000316448 PDIA4P13667 645 aaKnown RBP18.47■□□□□ 0.55
CALR-201ENST00000316448 RXRAP19793 462 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 GRIPAP1Q4V328 841 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 DALRD3Q5D0E6 543 aaKnown RBP18.47■□□□□ 0.55
CALR-201ENST00000316448 MTMR6Q9Y217 621 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 LIFRP42702 1097 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 CRKP46108 304 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 SEC23AQ15436 765 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 SGMS1Q86VZ5 419 aa18.47■□□□□ 0.55
CALR-201ENST00000316448 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms