RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 DBF4Q9UBU7 674 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 G3BP2Q9UN86 482 aaKnown RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 TNRC6CQ9HCJ0 1690 aaKnown RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 A0A1W2PQ27 194 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 A0A1W2PQ64 194 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 A0A1W2PQD8 194 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 GOLGA6CA6NDK9 693 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 GOLGA6BA6NDN3 693 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 RTN3O95197 1032 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 GOLGA6DP0CG33 693 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 FNTAP49354 379 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 GNL2Q13823 731 aaKnown RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 MFSD4BQ5TF39 518 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 E4F1Q66K89 784 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 CEP112Q8N8E3 955 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 LINS1Q8NG48 757 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 SYTL4Q96C24 671 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 SLX1AQ9BQ83 275 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 GOLGA6AQ9NYA3 693 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 MYO6Q9UM54 1294 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 CYP46A1Q9Y6A2 500 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 MAST2Q6P0Q8 1798 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 ENO4A6NNW6 628 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 MYO1FO00160 1098 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 PES1O00541 588 aaKnown RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 ZSCAN9O15535 394 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 ATP5JP18859 108 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 RPS6KB1P23443 525 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 KRT85P78386 507 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 HSP90B2PQ58FF3 399 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 TLDC1Q6P9B6 456 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 KSR2Q6VAB6 950 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 LRP10Q7Z4F1 713 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 SPATA21Q7Z572 469 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-201ENST00000316433 ZRANB1Q9UGI0 708 aa7.57□□□□□ -1.2
ZNF540-201ENST00000316433 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.56□□□□□ -1.2
ZNF540-201ENST00000316433 FIBPO43427 364 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 URI1O94763 535 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-201ENST00000316433 PAX3P23760 479 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 CCT5P48643 541 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 SKIDA1Q1XH10 827 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 MCM10Q7L590 875 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 TBC1D5Q92609 795 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 RABGGTAQ92696 567 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 FAM204AQ9H8W3 233 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 RCOR1Q9UKL0 485 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 FSBPO95073 299 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 MAP3K9P80192 1104 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 RESTQ13127 1097 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 LAMB3Q13751 1172 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 KRT24Q2M2I5 525 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 FILIP1LQ4L180 1135 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 RSRC2Q7L4I2 434 aaKnown RBP7.56□□□□□ -1.2
ZNF540-201ENST00000316433 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 HOMER1Q86YM7 354 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 KIRREL3Q8IZU9 778 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 MAB21L3Q8N8X9 362 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 OR8K1Q8NGG5 319 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 LZTS2Q9BRK4 669 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 MTA3Q9BTC8 594 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 ZNF609O15014 1411 aa7.56□□□□□ -1.2
ZNF540-201ENST00000316433 RBM47A0AV96 593 aaKnown RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 H7C1W4 665 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 EZRP15311 586 aaKnown RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 IBSPP21815 317 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 KCNB1Q14721 858 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 CEP85LQ5SZL2 805 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 PPP1R42Q7Z4L9 355 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 LMBR1Q8WVP7 490 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 NUP62CLQ9H1M0 184 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 PICK1Q9NRD5 415 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 DDX20Q9UHI6 824 aaKnown RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 FMNL1O95466 1100 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 RANBP1P43487 201 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 GSDMDP57764 484 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 RASA3Q14644 834 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 CCDC178Q5BJE1 867 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 B4GALNT2Q8NHY0 566 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 AFAP1L1Q8TED9 768 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 FAM163AQ96GL9 167 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 ATP6V0A4Q9HBG4 840 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 BATF3Q9NR55 127 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 STAG3Q9UJ98 1225 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 EID1Q9Y6B2 187 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 U3KPZ7 1027 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 ATXN2Q99700 1313 aaKnown RBP7.55□□□□□ -1.2
ZNF540-201ENST00000316433 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 AKAP11Q9UKA4 1901 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 PFKFB2O60825 505 aa7.55□□□□□ -1.2
ZNF540-201ENST00000316433 LTKP29376 864 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms