RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
SPAST-201ENST00000315285 TTC38Q5R3I4 469 aa15.53■□□□□ 0.08
SPAST-201ENST00000315285 LMBR1Q8WVP7 490 aa15.53■□□□□ 0.08
SPAST-201ENST00000315285 SEC62Q99442 399 aaKnown RBP15.53■□□□□ 0.08
SPAST-201ENST00000315285 LSG1Q9H089 658 aaKnown RBP15.53■□□□□ 0.08
SPAST-201ENST00000315285 INCENPQ9NQS7 918 aa15.53■□□□□ 0.08
SPAST-201ENST00000315285 VPS18Q9P253 973 aa15.53■□□□□ 0.08
SPAST-201ENST00000315285 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 TRIM14Q14142 442 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 ADALQ6DHV7 355 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 SPATA5Q8NB90 893 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
SPAST-201ENST00000315285 BICD1Q96G01 975 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
SPAST-201ENST00000315285 PPP1R2P41236 205 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 PPP2R5BQ15173 497 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 SPECC1LQ69YQ0 1117 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 SV2BQ7L1I2 683 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 USP37Q86T82 979 aa15.52■□□□□ 0.08
SPAST-201ENST00000315285 NR1I2O75469 434 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 PRPHP41219 470 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 RASEFQ8IZ41 740 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 USP28Q96RU2 1077 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 DNAI2Q9GZS0 605 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 ARHGAP6O43182 974 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 POSTNQ15063 836 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 CCDC155Q8N6L0 562 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 MAPK8IP1Q9UQF2 711 aa15.52■□□□□ 0.07
SPAST-201ENST00000315285 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 NOC4LQ9BVI4 516 aaKnown RBP15.51■□□□□ 0.07
SPAST-201ENST00000315285 KCNJ14Q9UNX9 436 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 ZNF500O60304 480 aaPredicted RBP15.51■□□□□ 0.07
SPAST-201ENST00000315285 PFKFB2O60825 505 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 HS2ST1Q7LGA3 356 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 TTC6Q86TZ1 520 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 TTF2Q9UNY4 1162 aaKnown RBP15.51■□□□□ 0.07
SPAST-201ENST00000315285 METP08581 1390 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 HSPA2P54652 639 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 PDE4DQ08499 809 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 TCIRG1Q13488 830 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 HAUS7Q99871 368 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 CARD6Q9BX69 1037 aa15.51■□□□□ 0.07
SPAST-201ENST00000315285 VAV2P52735 878 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 GIGYF2Q6Y7W6 1299 aaKnown RBP15.5■□□□□ 0.07
SPAST-201ENST00000315285 HDXQ7Z353 690 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 SIRT2Q8IXJ6 389 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 TEX11Q8IYF3 940 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 MROH5Q6ZUA9 1318 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 FAM13AO94988 1023 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 PHKG2P15735 406 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 PAK1Q13153 545 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 ELF2Q15723 593 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 NAPGQ99747 312 aaPredicted RBP15.5■□□□□ 0.07
SPAST-201ENST00000315285 XPO4Q9C0E2 1151 aaKnown RBP15.5■□□□□ 0.07
SPAST-201ENST00000315285 KIAA1468Q9P260 1216 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 CYP26C1Q6V0L0 522 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 RASAL2Q9UJF2 1139 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 IGSF1Q8N6C5 1336 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 HSPD1P10809 573 aaKnown RBP15.5■□□□□ 0.07
SPAST-201ENST00000315285 ATRIPQ8WXE1 791 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 MAP4K1Q92918 833 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 SAP30BPQ9UHR5 308 aaKnown RBP15.5■□□□□ 0.07
SPAST-201ENST00000315285 ZFYVE16Q7Z3T8 1539 aa15.5■□□□□ 0.07
SPAST-201ENST00000315285 TRAF5O00463 557 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 ADCK5Q3MIX3 580 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 C8orf37Q96NL8 207 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 PREX2Q70Z35 1606 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 CSGALNACT2Q8N6G5 542 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 CCDC65Q8IXS2 484 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 MRVI1Q9Y6F6 885 aa15.49■□□□□ 0.07
SPAST-201ENST00000315285 GNPATO15228 680 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 PFKFB1P16118 471 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 MRPL12P52815 198 aaKnown RBP15.48■□□□□ 0.07
SPAST-201ENST00000315285 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 CNNM4Q6P4Q7 775 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 COPRSQ9NQ92 184 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 AATFQ9NY61 560 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPAST-201ENST00000315285 TUBB2AQ13885 445 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 NBPF11Q86T75 865 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 IFT81Q8WYA0 676 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 TUBB2BQ9BVA1 445 aa15.48■□□□□ 0.07
SPAST-201ENST00000315285 MTX1Q13505 466 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 PNOCQ13519 176 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 TRMT44Q8IYL2 757 aaKnown RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 NAP1L4Q99733 375 aaKnown RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 HDAC9Q9UKV0 1011 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 RIMBP2O15034 1052 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 CUL4AQ13619 759 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 PROSER3Q2NL68 480 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 TMTC1Q8IUR5 882 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms