RNA–Protein interactions for RNA: ENST00000312239.9

HP1BP3-201, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HP1BP3, Length 3,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-201ENST00000312239 PTPN14Q15678 1187 aa8.48□□□□□ -1.05
HP1BP3-201ENST00000312239 TMEM87BQ96K49 555 aa8.48□□□□□ -1.05
HP1BP3-201ENST00000312239 CIAO1O76071 339 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 DNA2P51530 1060 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ZNF445P59923 1031 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ZYXQ15942 572 aaKnown RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 CLIC6Q96NY7 704 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 TNKSO95271 1327 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 NCAPD2Q15021 1401 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 PFKFB2O60825 505 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ADD2P35612 726 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 UBASH3AP57075 661 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 FAM160A1Q05DH4 1040 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 TCP11L1Q9NUJ3 509 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 IFNKQ9P0W0 207 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ZKSCAN5Q9Y2L8 839 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 POLR2DO15514 142 aaKnown RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 TOB2Q14106 344 aaPredicted RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 LETM2Q2VYF4 491 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 CCDC178Q5BJE1 867 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 NSUN7Q8NE18 718 aaKnown RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 ISCA1Q9BUE6 129 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 CBX8Q9HC52 389 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.47□□□□□ -1.052e-6■■■□□ 15.7
HP1BP3-201ENST00000312239 CLIC4Q9Y696 253 aa8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 V9GYY5 206 aaPredicted RBP8.47□□□□□ -1.05
HP1BP3-201ENST00000312239 MEGF6O75095 1541 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 SKILP12757 684 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 PRKCSHP14314 528 aaPredicted RBP8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 PTPN21Q16825 1174 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 MYSM1Q5VVJ2 828 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 RRAGBQ5VZM2 374 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 DPP8Q6V1X1 898 aaPredicted RBP8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 SEPT12Q8IYM1 358 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 LLPHQ9BRT6 129 aaKnown RBP8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 DEF6Q9H4E7 631 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 BMP2KQ9NSY1 1161 aaPredicted RBP8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 ITSN1Q15811 1721 aa8.46□□□□□ -1.05
HP1BP3-201ENST00000312239 URI1O94763 535 aaPredicted RBP8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 KRT2P35908 639 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 TBC1D9BQ66K14 1250 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 BRAPQ7Z569 592 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 CAGE1Q8TC20 777 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 ZNF804BA4D1E1 1349 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 ZNF202O95125 648 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 STAT6P42226 847 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 NOLC1Q14978 699 aaKnown RBP eCLIP8.46□□□□□ -1.065e-10■■□□□ 13.1
HP1BP3-201ENST00000312239 UVSSAQ2YD98 709 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 JAKMIP3Q5VZ66 844 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 GPR108Q9NPR9 543 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
HP1BP3-201ENST00000312239 PRR29P0C7W0 189 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 PRDX5P30044 214 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 ZNF827Q17R98 1081 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 WDR78Q5VTH9 848 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 APOA5Q6Q788 366 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 STOX1Q6ZVD7 989 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.063e-7■■□□□ 11.9
HP1BP3-201ENST00000312239 EEF2KMTQ96G04 330 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 CEP89Q96ST8 783 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 CLCN1P35523 988 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 UBE3CQ15386 1083 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 TRMT44Q8IYL2 757 aaKnown RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 NUP88Q99567 741 aaPredicted RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 ZNHIT6Q9NWK9 470 aaKnown RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 KCNH3Q9ULD8 1083 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 N4BP3O15049 544 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 EPB41L2O43491 1005 aaKnown RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 DEXIO95424 95 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 MNX1P50219 401 aaPredicted RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 ARHGAP29Q52LW3 1261 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 OGFOD1Q8N543 542 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 FANCBQ8NB91 859 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 WDR66Q8TBY9 1149 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 DYNLL2Q96FJ2 89 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 CLSTN2Q9H4D0 955 aa8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 TTF2Q9UNY4 1162 aaKnown RBP8.45□□□□□ -1.06
HP1BP3-201ENST00000312239 RTL9Q8NET4 1388 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 ERVV-1B6SEH8 477 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 USP17L8P0C7I0 530 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 NR5A1Q13285 461 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 ITPK1Q13572 414 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 FBXO18Q8NFZ0 1043 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 TTC14Q96N46 770 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 PCDHA7Q9UN72 937 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 NEURL4Q96JN8 1562 aa8.44□□□□□ -1.06
HP1BP3-201ENST00000312239 COBLO75128 1261 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms