RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 SSBP05455 408 aaKnown RBP eCLIP18.4■□□□□ 0.54
SOX30-202ENST00000311371 TUBBP07437 444 aa18.4■□□□□ 0.54
SOX30-202ENST00000311371 KCNA6P17658 529 aa18.4■□□□□ 0.54
SOX30-202ENST00000311371 NSUN7Q8NE18 718 aaKnown RBP18.4■□□□□ 0.54
SOX30-202ENST00000311371 AGPSO00116 658 aa18.4■□□□□ 0.54
SOX30-202ENST00000311371 ABL1P00519 1130 aa18.4■□□□□ 0.54
SOX30-202ENST00000311371 POLA2Q14181 598 aa18.4■□□□□ 0.54
SOX30-202ENST00000311371 HINFPQ9BQA5 517 aa18.4■□□□□ 0.54
SOX30-202ENST00000311371 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 GCKP35557 465 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 WHAMMP3Q1A5X7 153 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 WLSQ5T9L3 541 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 OTUD7BQ6GQQ9 843 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 OLFM4Q6UX06 510 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 B4GALNT4Q76KP1 1039 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 NME9Q86XW9 330 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 NEK1Q96PY6 1258 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 NAPGQ99747 312 aaPredicted RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 NCOA5Q9HCD5 579 aaKnown RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 DDX20Q9UHI6 824 aaKnown RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 MAP3K5Q99683 1374 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 RPSAP08865 295 aaKnown RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 PDHBP11177 359 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 PNOCQ13519 176 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 E2F5Q15329 346 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 LINC00301Q8NCQ3 95 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
SOX30-202ENST00000311371 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
SOX30-202ENST00000311371 PFKFB1P16118 471 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 ATL3Q6DD88 541 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 ZNF483Q8TF39 744 aaPredicted RBP18.38■□□□□ 0.53
SOX30-202ENST00000311371 RTEL1Q9NZ71 1219 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 GOLGA6BA6NDN3 693 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 RTN2O75298 545 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 CDR1P51861 262 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 CCDC40Q4G0X9 1142 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 AP1ARQ63HQ0 302 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
SOX30-202ENST00000311371 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 SCLT1Q96NL6 688 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 ATP7BP35670 1465 aa18.38■□□□□ 0.53
SOX30-202ENST00000311371 PEX19P40855 299 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 SSR1P43307 286 aaKnown RBP18.37■□□□□ 0.53
SOX30-202ENST00000311371 PDCLQ13371 301 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 TUBB2AQ13885 445 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 TUBB2BQ9BVA1 445 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 SPTLC2O15270 562 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
SOX30-202ENST00000311371 GPATCH3Q96I76 525 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 KIF9Q9HAQ2 790 aa18.37■□□□□ 0.53
SOX30-202ENST00000311371 TMCO5BA8MYB1 307 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 ZEB2O60315 1214 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 MYO6Q9UM54 1294 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 A1BGP04217 495 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 ARHGAP25P42331 645 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 USP14P54578 494 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 GRIK3Q13003 919 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 ZKSCAN8Q15776 578 aaPredicted RBP18.36■□□□□ 0.53
SOX30-202ENST00000311371 SELENOOQ9BVL4 669 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 AKR1B15C9JRZ8 316 aaPredicted RBP18.36■□□□□ 0.53
SOX30-202ENST00000311371 FOXO3O43524 673 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 PPP1R12BO60237 982 aaPredicted RBP18.36■□□□□ 0.53
SOX30-202ENST00000311371 NBPF7P0C2Y1 421 aaPredicted RBP18.36■□□□□ 0.53
SOX30-202ENST00000311371 PDE4BQ07343 736 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 ACRBPQ8NEB7 543 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 ARMC2Q8NEN0 867 aa18.36■□□□□ 0.53
SOX30-202ENST00000311371 USP42Q9H9J4 1324 aaKnown RBP18.35■□□□□ 0.53
SOX30-202ENST00000311371 MYBL2P10244 700 aa18.35■□□□□ 0.53
SOX30-202ENST00000311371 MARCKSP29966 332 aaPredicted RBP18.35■□□□□ 0.53
SOX30-202ENST00000311371 AACSQ86V21 672 aa18.35■□□□□ 0.53
SOX30-202ENST00000311371 SLC40A1Q9NP59 571 aa18.35■□□□□ 0.53
SOX30-202ENST00000311371 GBP2P32456 591 aaPredicted RBP18.35■□□□□ 0.53
SOX30-202ENST00000311371 CCDC13Q8IYE1 715 aa18.35■□□□□ 0.53
SOX30-202ENST00000311371 KCNG4Q8TDN1 519 aa18.35■□□□□ 0.53
SOX30-202ENST00000311371 SPATS2LQ9NUQ6 558 aaKnown RBP18.35■□□□□ 0.53
SOX30-202ENST00000311371 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
SOX30-202ENST00000311371 AP1G2O75843 785 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 EZRP15311 586 aaKnown RBP18.34■□□□□ 0.53
SOX30-202ENST00000311371 SMTNP53814 917 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 SNCBQ16143 134 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 HMG20BQ9P0W2 317 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 STRCP1A6NGW2 1772 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 CDC27P30260 824 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 ATP1A2P50993 1020 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 SF3B2Q13435 895 aaKnown RBP18.34■□□□□ 0.53
SOX30-202ENST00000311371 LONRF3Q496Y0 759 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
SOX30-202ENST00000311371 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
SOX30-202ENST00000311371 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
SOX30-202ENST00000311371 BOLA2Q9H3K6 86 aa18.34■□□□□ 0.53
SOX30-202ENST00000311371 ETAA1Q9NY74 926 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms