RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CTNNBL1Q8WYA6 563 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 PRCCQ92733 491 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 ZNF768Q9H5H4 540 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 TLR9Q9NR96 1032 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SPANXCQ9NY87 97 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 RAXQ9Y2V3 346 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 CHMP3Q9Y3E7 222 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 NEU2Q9Y3R4 380 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 LRRC14Q15048 493 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PABPC1LQ4VXU2 614 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 BARD1Q99728 777 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 MIS18AQ9NYP9 233 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 CIDEBQ9UHD4 219 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 MST1RQ04912 1400 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PRKAR2BP31323 418 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 EN1Q05925 392 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 ADCY1Q08828 1119 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ITKQ08881 620 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TMEM62Q0P6H9 643 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 NR1I3Q14994 352 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 RASA2Q15283 850 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SAMD5Q5TGI4 173 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 LRCH2Q5VUJ6 765 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 REXO1Q8N1G1 1221 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 CCDC191Q8NCU4 936 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PPFIBP2Q8ND30 876 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SLC39A7Q92504 469 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SGCDQ92629 289 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SENP7Q9BQF6 1050 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 RAI14Q9P0K7 980 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ADGRE2Q9UHX3 823 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SLC13A4Q9UKG4 626 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 WASF3Q9UPY6 502 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TSC22D4Q9Y3Q8 395 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 LINC00854A0A1B0GVQ3 168 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 FAM221BA6H8Z2 402 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TRAK2O60296 914 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 URI1O94763 535 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 LETM1O95202 739 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 ZNF23P17027 643 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 WASP42768 502 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 LMOD3Q0VAK6 560 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 RIC3Q7Z5B4 369 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 RNF169Q8NCN4 708 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PSMA8Q8TAA3 256 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ATG4AQ8WYN0 398 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ROBO4Q8WZ75 1007 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 NUS1Q96E22 293 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 MMTAG2Q9BU76 263 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 GPBP1L1Q9HC44 474 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 PAPOLBQ9NRJ5 636 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 MSRB2Q9Y3D2 182 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 CEP164Q9UPV0 1460 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TRPM1Q7Z4N2 1603 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ADAMTSL3P82987 1691 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 KCNA5P22460 613 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 CTHP32929 405 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 STK4Q13043 487 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 INTS3Q68E01 1043 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 IQCEQ6IPM2 695 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PDXDC2PQ6P474 469 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 BNIPLQ7Z465 357 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 LARGE2Q8N3Y3 721 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ATP2A3Q93084 1043 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PTPN18Q99952 460 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 KLHDC3Q9BQ90 382 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 CELF4Q9BZC1 486 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 TMEM165Q9HC07 324 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PHF24Q9UPV7 400 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 IKBKGQ9Y6K9 419 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ZSCAN12O43309 604 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 VAMP4O75379 141 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 KRT33AO76009 404 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 KRT18P05783 430 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 PSMA3P25788 255 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ACTN2P35609 894 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 ZBED6P86452 979 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 EXOSC10Q01780 885 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 COL16A1Q07092 1604 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 BRD3Q15059 726 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 NBPF1Q3BBV0 1214 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 CARMIL1Q5VZK9 1371 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 DDX17Q92841 729 aaKnown RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 ERCC4Q92889 916 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 HIC2Q96JB3 615 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 PANK2Q9BZ23 570 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 TINAGL1Q9GZM7 467 aaPredicted RBP1.54□□□□□ -2.16
CEP290-201ENST00000309041 ERVMER34-1Q9H9K5 563 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 THEGQ9P2T0 379 aa1.54□□□□□ -2.16
CEP290-201ENST00000309041 SLCO1B7G3V0H7 640 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 SPATA31C1P0DKV0 1188 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 IRX5P78411 483 aaPredicted RBP1.53□□□□□ -2.16
CEP290-201ENST00000309041 SERINC3Q13530 473 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 FAM122CQ6P4D5 195 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 NEK10Q6ZWH5 1172 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 INTS8Q75QN2 995 aaKnown RBP1.53□□□□□ -2.16
CEP290-201ENST00000309041 LINGO2Q7L985 606 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 BCAS4Q8TDM0 211 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 STAG1Q8WVM7 1258 aa1.53□□□□□ -2.16
CEP290-201ENST00000309041 RAX2Q96IS3 184 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms