RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SLC4A8Q2Y0W8 1093 aa26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 LRSAM1Q6UWE0 723 aa26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 CRNKL1Q9BZJ0 848 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 TIAM2Q8IVF5 1701 aa26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 APOA5Q6Q788 366 aa26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 MICU3Q86XE3 530 aa26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 DCP1AQ9NPI6 582 aaPredicted RBP26.31■■□□□ 1.8
PDLIM2-202ENST00000308354 PRDM1O75626 825 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 GUCY1B3Q02153 619 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 TMC4Q7Z404 712 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 SYAP1Q96A49 352 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 PDGFDQ9GZP0 370 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 RBSNQ9H1K0 784 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 RNF41Q9H4P4 317 aaPredicted RBP26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 STK32BQ9NY57 414 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 CPLX1O14810 134 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 ZBTB22O15209 634 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 ALDH1B1P30837 517 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 ADD1P35611 737 aaKnown RBP26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 UBE2HP62256 183 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 MASTLQ96GX5 879 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 ANAPC4Q9UJX5 808 aa26.3■■□□□ 1.8
PDLIM2-202ENST00000308354 CCDC88AQ3V6T2 1871 aa26.29■■□□□ 1.8
PDLIM2-202ENST00000308354 DEFB132Q7Z7B7 95 aa26.29■■□□□ 1.8
PDLIM2-202ENST00000308354 METAP2P50579 478 aaKnown RBP eCLIP26.29■■□□□ 1.8
PDLIM2-202ENST00000308354 MPNDQ8N594 471 aa26.29■■□□□ 1.8
PDLIM2-202ENST00000308354 DHX16O60231 1041 aaKnown RBP26.28■■□□□ 1.8
PDLIM2-202ENST00000308354 CYP2D6P10635 497 aa26.28■■□□□ 1.8
PDLIM2-202ENST00000308354 COL11A2P13942 1736 aaPredicted RBP26.28■■□□□ 1.8
PDLIM2-202ENST00000308354 CDC27P30260 824 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 MFSD14BQ5SR56 506 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 C2CD5Q86YS7 1000 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 SH3RF3Q8TEJ3 882 aaPredicted RBP26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 TFIP11Q9UBB9 837 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 LRRC37AA6NMS7 1700 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 SGMS1Q86VZ5 419 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 RGPD3A6NKT7 1758 aaPredicted RBP26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 MAST2Q6P0Q8 1798 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 RGPD4Q7Z3J3 1758 aa26.27■■□□□ 1.8
PDLIM2-202ENST00000308354 LTBP1Q14766 1721 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 ZBTB43O43298 467 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 CSPP1Q1MSJ5 1256 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 GIMAP6Q6P9H5 292 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 DPP8Q6V1X1 898 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 ZNF219Q9P2Y4 722 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 TAOK2Q9UL54 1235 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 CCDC69A6NI79 296 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 CHRNA5P30532 468 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 LIFRP42702 1097 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 GTF2IP78347 998 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 RESTQ13127 1097 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 OTUD7BQ6GQQ9 843 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 CHMP4CQ96CF2 233 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 ATP8A2Q9NTI2 1148 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 ORC3Q9UBD5 711 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 KIF3AQ9Y496 699 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 SLC12A7Q9Y666 1083 aa26.26■■□□□ 1.79
PDLIM2-202ENST00000308354 RANBP6O60518 1105 aaKnown RBP26.25■■□□□ 1.79
PDLIM2-202ENST00000308354 ESR2Q92731 530 aa26.25■■□□□ 1.79
PDLIM2-202ENST00000308354 FBXW7Q969H0 707 aa26.25■■□□□ 1.79
PDLIM2-202ENST00000308354 ZC3H12CQ9C0D7 883 aaKnown RBP26.25■■□□□ 1.79
PDLIM2-202ENST00000308354 GJB4Q9NTQ9 266 aa26.25■■□□□ 1.79
PDLIM2-202ENST00000308354 USP17L8P0C7I0 530 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 KRT85P78386 507 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 WTAPQ15007 396 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 DOK7Q18PE1 504 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 MCM9Q9NXL9 1143 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 GSTO1P78417 241 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 SART3Q15020 963 aaKnown RBP26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 UBAC1Q9BSL1 405 aa26.24■■□□□ 1.79
PDLIM2-202ENST00000308354 ERICH2A1L162 156 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 GOLGA8AA7E2F4 631 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 USP5P45974 858 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 PHKBQ93100 1093 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 H0YIN7 160 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 TTC6Q86TZ1 520 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 FAM217BQ9NTX9 383 aaPredicted RBP26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 MROH7-TTC4A0A0A0MT08 1334 aa26.23■■□□□ 1.79
PDLIM2-202ENST00000308354 DUOX1Q9NRD9 1551 aa26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 TMED8Q6PL24 325 aaPredicted RBP26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 RTFDC1Q9BY42 306 aaPredicted RBP26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 TMX4Q9H1E5 349 aaPredicted RBP26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 TNKSO95271 1327 aa26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 BAG3O95817 575 aa26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 FAM43AQ8N2R8 423 aa26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 TGFBRAP1Q8WUH2 860 aa26.22■■□□□ 1.79
PDLIM2-202ENST00000308354 BTDP43251 543 aa26.21■■□□□ 1.79
PDLIM2-202ENST00000308354 CCDC183Q5T5S1 534 aa26.21■■□□□ 1.79
PDLIM2-202ENST00000308354 AIFM3Q96NN9 605 aa26.21■■□□□ 1.79
PDLIM2-202ENST00000308354 NOL10Q9BSC4 688 aaKnown RBP26.21■■□□□ 1.79
PDLIM2-202ENST00000308354 COA1Q9GZY4 146 aa26.21■■□□□ 1.79
PDLIM2-202ENST00000308354 LDHCP07864 332 aa26.2■■□□□ 1.79
PDLIM2-202ENST00000308354 SF3B2Q13435 895 aaKnown RBP26.2■■□□□ 1.79
PDLIM2-202ENST00000308354 MXD3Q9BW11 206 aa26.2■■□□□ 1.79
PDLIM2-202ENST00000308354 ARPP21Q9UBL0 812 aaPredicted RBP26.2■■□□□ 1.79
PDLIM2-202ENST00000308354 F8W031 263 aaPredicted RBP26.2■■□□□ 1.78
PDLIM2-202ENST00000308354 SYNE3Q6ZMZ3 975 aa26.2■■□□□ 1.78
PDLIM2-202ENST00000308354 ANP32BQ92688 251 aaKnown RBP26.2■■□□□ 1.78
PDLIM2-202ENST00000308354 C8orf76Q96K31 380 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms