RNA–Protein interactions for RNA: ENST00000308243.7

CRB3-201, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-201ENST00000308243 PPP4CP60510 307 aa17.45■□□□□ 0.38
CRB3-201ENST00000308243 TTF1Q15361 905 aaPredicted RBP17.45■□□□□ 0.38
CRB3-201ENST00000308243 ERO1BQ86YB8 467 aa17.45■□□□□ 0.38
CRB3-201ENST00000308243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.45■□□□□ 0.38
CRB3-201ENST00000308243 ZNF112Q9UJU3 913 aa17.45■□□□□ 0.38
CRB3-201ENST00000308243 GTF2A2P52657 109 aa17.44■□□□□ 0.38
CRB3-201ENST00000308243 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
CRB3-201ENST00000308243 PICALMQ13492 652 aa17.44■□□□□ 0.38
CRB3-201ENST00000308243 IFNL1Q8IU54 200 aa17.44■□□□□ 0.38
CRB3-201ENST00000308243 ZFPM1Q8IX07 1006 aa17.44■□□□□ 0.38
CRB3-201ENST00000308243 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
CRB3-201ENST00000308243 PIH1D3Q9NQM4 214 aaKnown RBP17.44■□□□□ 0.38
CRB3-201ENST00000308243 TESPA1A2RU30 521 aaPredicted RBP17.43■□□□□ 0.38
CRB3-201ENST00000308243 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
CRB3-201ENST00000308243 IDH1O75874 414 aaKnown RBP17.43■□□□□ 0.38
CRB3-201ENST00000308243 GJA5P36382 358 aa17.43■□□□□ 0.38
CRB3-201ENST00000308243 NOM1Q5C9Z4 860 aaKnown RBP17.43■□□□□ 0.38
CRB3-201ENST00000308243 CERS3Q8IU89 383 aa17.43■□□□□ 0.38
CRB3-201ENST00000308243 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
CRB3-201ENST00000308243 ZKSCAN4Q969J2 545 aaPredicted RBP17.43■□□□□ 0.38
CRB3-201ENST00000308243 CFHR5Q9BXR6 569 aa17.43■□□□□ 0.38
CRB3-201ENST00000308243 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
CRB3-201ENST00000308243 TBC1D8O95759 1140 aa17.42■□□□□ 0.38
CRB3-201ENST00000308243 CYP7A1P22680 504 aa17.42■□□□□ 0.38
CRB3-201ENST00000308243 MAP3K10Q02779 954 aa17.42■□□□□ 0.38
CRB3-201ENST00000308243 PPATQ06203 517 aa17.42■□□□□ 0.38
CRB3-201ENST00000308243 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
CRB3-201ENST00000308243 DDX4Q9NQI0 724 aaKnown RBP17.42■□□□□ 0.38
CRB3-201ENST00000308243 AATFQ9NY61 560 aaKnown RBP eCLIP17.42■□□□□ 0.38
CRB3-201ENST00000308243 SNCAIPQ9Y6H5 919 aa17.42■□□□□ 0.38
CRB3-201ENST00000308243 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
CRB3-201ENST00000308243 DDTLA6NHG4 134 aaPredicted RBP17.41■□□□□ 0.38
CRB3-201ENST00000308243 TBC1D12O60347 775 aa17.41■□□□□ 0.38
CRB3-201ENST00000308243 SOX10P56693 466 aa17.41■□□□□ 0.38
CRB3-201ENST00000308243 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
CRB3-201ENST00000308243 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
CRB3-201ENST00000308243 MS4A4AQ96JQ5 239 aa17.41■□□□□ 0.38
CRB3-201ENST00000308243 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 CETPP11597 493 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 ATP5JP18859 108 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 INPP5BP32019 993 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 PPIL2Q13356 520 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 SNAPC2Q13487 334 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 NOL9Q5SY16 702 aaKnown RBP17.4■□□□□ 0.38
CRB3-201ENST00000308243 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
CRB3-201ENST00000308243 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 OSBPL5Q9H0X9 879 aaPredicted RBP17.4■□□□□ 0.38
CRB3-201ENST00000308243 DHX36Q9H2U1 1008 aaKnown RBP17.4■□□□□ 0.38
CRB3-201ENST00000308243 ANTXR1Q9H6X2 564 aa17.4■□□□□ 0.38
CRB3-201ENST00000308243 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.37
CRB3-201ENST00000308243 GPR25O00155 361 aa17.39■□□□□ 0.37
CRB3-201ENST00000308243 AAMPQ13685 434 aa17.39■□□□□ 0.37
CRB3-201ENST00000308243 CCL15Q16663 113 aa17.39■□□□□ 0.37
CRB3-201ENST00000308243 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
CRB3-201ENST00000308243 AKAP11Q9UKA4 1901 aa17.39■□□□□ 0.37
CRB3-201ENST00000308243 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 IGF2BP3O00425 579 aaKnown RBP eCLIP17.38■□□□□ 0.37
CRB3-201ENST00000308243 IRF6O14896 467 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
CRB3-201ENST00000308243 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 TGFBRAP1Q8WUH2 860 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 DNAJC2Q99543 621 aaKnown RBP17.38■□□□□ 0.37
CRB3-201ENST00000308243 PTPN18Q99952 460 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 PICK1Q9NRD5 415 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 PI4KBQ9UBF8 816 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 PCDHB15Q9Y5E8 787 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 NDUFB9Q9Y6M9 179 aa17.38■□□□□ 0.37
CRB3-201ENST00000308243 TNRC18O15417 2968 aaPredicted RBP17.38■□□□□ 0.37
CRB3-201ENST00000308243 GOLIM4O00461 696 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 FKTNO75072 461 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 SLC9C2Q5TAH2 1124 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
CRB3-201ENST00000308243 SCYL3Q8IZE3 742 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 ZNF296Q8WUU4 475 aaPredicted RBP17.37■□□□□ 0.37
CRB3-201ENST00000308243 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
CRB3-201ENST00000308243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.37■□□□□ 0.37
CRB3-201ENST00000308243 HERC5Q9UII4 1024 aaKnown RBP17.37■□□□□ 0.37
CRB3-201ENST00000308243 COL2A1P02458 1487 aaPredicted RBP17.37■□□□□ 0.37
CRB3-201ENST00000308243 CXCL11O14625 94 aa17.36■□□□□ 0.37
CRB3-201ENST00000308243 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
CRB3-201ENST00000308243 PRPF38BQ5VTL8 546 aaKnown RBP17.36■□□□□ 0.37
CRB3-201ENST00000308243 GPATCH3Q96I76 525 aa17.36■□□□□ 0.37
CRB3-201ENST00000308243 HAUS7Q99871 368 aa17.36■□□□□ 0.37
CRB3-201ENST00000308243 ZCCHC17Q9NP64 241 aaKnown RBP17.36■□□□□ 0.37
CRB3-201ENST00000308243 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
CRB3-201ENST00000308243 DYNLL1P63167 89 aaKnown RBP17.35■□□□□ 0.37
CRB3-201ENST00000308243 CTU1Q7Z7A3 348 aaKnown RBP17.35■□□□□ 0.37
CRB3-201ENST00000308243 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
CRB3-201ENST00000308243 MIGA1Q8NAN2 632 aa17.35■□□□□ 0.37
CRB3-201ENST00000308243 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
CRB3-201ENST00000308243 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
CRB3-201ENST00000308243 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
CRB3-201ENST00000308243 KCNH4Q9UQ05 1017 aa17.35■□□□□ 0.37
CRB3-201ENST00000308243 ZHX2Q9Y6X8 837 aa17.35■□□□□ 0.37
CRB3-201ENST00000308243 HLA-DOAP06340 250 aa17.34■□□□□ 0.37
CRB3-201ENST00000308243 PDE6AP16499 860 aa17.34■□□□□ 0.37
CRB3-201ENST00000308243 FLT1P17948 1338 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms