RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
SCG2-201ENST00000305409 ELP1O95163 1332 aa13.29□□□□□ -0.28
SCG2-201ENST00000305409 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 NMT2O60551 498 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 CNNM2Q9H8M5 875 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 WDR19Q8NEZ3 1342 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 A0A087WWV3 80 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 APBA3O96018 575 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 ADRA2BP18089 450 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 ME1P48163 572 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 NTRK3Q16288 839 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 FAM47AQ5JRC9 791 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
SCG2-201ENST00000305409 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 GOLPH3LQ9H4A5 285 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 IRS2Q9Y4H2 1338 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 LY75O60449 1722 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 CASZ1Q86V15 1759 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
SCG2-201ENST00000305409 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.28
SCG2-201ENST00000305409 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.28
SCG2-201ENST00000305409 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.28
SCG2-201ENST00000305409 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.28
SCG2-201ENST00000305409 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.29
SCG2-201ENST00000305409 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 CCAR1Q8IX12 1150 aaKnown RBP13.27□□□□□ -0.29
SCG2-201ENST00000305409 DCP1AQ9NPI6 582 aaPredicted RBP13.27□□□□□ -0.29
SCG2-201ENST00000305409 TNKSO95271 1327 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 XDHP47989 1333 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 ERICH2A1L162 156 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 LIFRP42702 1097 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 KRT40Q6A162 431 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 PPP1R9BQ96SB3 815 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 TNMDQ9H2S6 317 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 POLLQ9UGP5 575 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 RCOR1Q9UKL0 485 aa13.27□□□□□ -0.29
SCG2-201ENST00000305409 CACNA1SQ13698 1873 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 SEMA3EO15041 775 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 LDHBP07195 334 aaKnown RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 KIF23Q02241 960 aaPredicted RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 SART3Q15020 963 aaKnown RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 COL23A1Q86Y22 540 aaPredicted RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 FUCA2Q9BTY2 467 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 RNF41Q9H4P4 317 aaPredicted RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 MCM9Q9NXL9 1143 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 COL24A1Q17RW2 1714 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 RTN1Q16799 776 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 ZNF654Q8IZM8 581 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 ENAHQ8N8S7 591 aaPredicted RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 SH3RF3Q8TEJ3 882 aaPredicted RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 ESR2Q92731 530 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 FBXW7Q969H0 707 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 DYNLL2Q96FJ2 89 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 ZNF396Q96N95 335 aaPredicted RBP13.26□□□□□ -0.29
SCG2-201ENST00000305409 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
SCG2-201ENST00000305409 BAZ2AQ9UIF9 1905 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 MARCKSP29966 332 aaPredicted RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 GNL2Q13823 731 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 MAP3K11Q16584 847 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 PCDHA7Q9UN72 937 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 STK38Q15208 465 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 SF3A1Q15459 793 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 FAM43AQ8N2R8 423 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 TDRD7Q8NHU6 1098 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 BRIP1Q9BX63 1249 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 SAP30BPQ9UHR5 308 aaKnown RBP13.25□□□□□ -0.29
SCG2-201ENST00000305409 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
SCG2-201ENST00000305409 UTRNP46939 3433 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
SCG2-201ENST00000305409 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 FSIP1Q8NA03 581 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 ZSCAN10Q96SZ4 725 aaPredicted RBP13.24□□□□□ -0.29
SCG2-201ENST00000305409 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 MYH13Q9UKX3 1938 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 CDKL5O76039 1030 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 SEC23AQ15436 765 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 FANCBQ8NB91 859 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 TGFBRAP1Q8WUH2 860 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 ANAPC4Q9UJX5 808 aa13.24□□□□□ -0.29
SCG2-201ENST00000305409 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms