RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 TFIP11Q9UBB9 837 aaKnown RBP22.67■■□□□ 1.22
HOXC4-201ENST00000303406 SLC12A7Q9Y666 1083 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 ERICH2A1L162 156 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 GOLGA8AA7E2F4 631 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 DYNLL1P63167 89 aaKnown RBP22.67■■□□□ 1.22
HOXC4-201ENST00000303406 DDR1Q08345 913 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 WTAPQ15007 396 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 PPP2R5BQ15173 497 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 TXNRD3Q86VQ6 643 aa22.67■■□□□ 1.22
HOXC4-201ENST00000303406 NTRK3Q16288 839 aa22.66■■□□□ 1.22
HOXC4-201ENST00000303406 UVSSAQ2YD98 709 aa22.66■■□□□ 1.22
HOXC4-201ENST00000303406 SBK1Q52WX2 424 aa22.66■■□□□ 1.22
HOXC4-201ENST00000303406 FLAD1Q8NFF5 587 aa22.66■■□□□ 1.22
HOXC4-201ENST00000303406 RGPD3A6NKT7 1758 aaPredicted RBP22.65■■□□□ 1.22
HOXC4-201ENST00000303406 RGPD4Q7Z3J3 1758 aa22.65■■□□□ 1.22
HOXC4-201ENST00000303406 DLEC1Q9Y238 1755 aa22.65■■□□□ 1.22
HOXC4-201ENST00000303406 GSTO1P78417 241 aa22.65■■□□□ 1.22
HOXC4-201ENST00000303406 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
HOXC4-201ENST00000303406 CERS3Q8IU89 383 aa22.65■■□□□ 1.22
HOXC4-201ENST00000303406 INCENPQ9NQS7 918 aa22.65■■□□□ 1.22
HOXC4-201ENST00000303406 FAM217BQ9NTX9 383 aaPredicted RBP22.65■■□□□ 1.22
HOXC4-201ENST00000303406 LTBP1Q14766 1721 aa22.64■■□□□ 1.22
HOXC4-201ENST00000303406 CDC27P30260 824 aa22.64■■□□□ 1.21
HOXC4-201ENST00000303406 GPSM2P81274 684 aa22.64■■□□□ 1.21
HOXC4-201ENST00000303406 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.21
HOXC4-201ENST00000303406 AKT1S1Q96B36 256 aa22.64■■□□□ 1.21
HOXC4-201ENST00000303406 PGBD1Q96JS3 809 aa22.64■■□□□ 1.21
HOXC4-201ENST00000303406 FUCA2Q9BTY2 467 aa22.64■■□□□ 1.21
HOXC4-201ENST00000303406 SENP2Q9HC62 589 aa22.64■■□□□ 1.21
HOXC4-201ENST00000303406 ARPP21Q9UBL0 812 aaPredicted RBP22.64■■□□□ 1.21
HOXC4-201ENST00000303406 ECM29Q5VYK3 1845 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 CCDC196A0A1B0GTZ2 297 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 MINDY4BA8MYZ0 360 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 ORC4O43929 436 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 IFNAR1P17181 557 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 PRDX5P30044 214 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 MICU3Q86XE3 530 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 DZIP1Q86YF9 867 aaKnown RBP22.63■■□□□ 1.21
HOXC4-201ENST00000303406 NLGN1Q8N2Q7 840 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 FAM43AQ8N2R8 423 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 WASF1Q92558 559 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 RTEL1Q9NZ71 1219 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 GGA1Q9UJY5 639 aa22.63■■□□□ 1.21
HOXC4-201ENST00000303406 IL1R1P14778 569 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 IARSP41252 1262 aaKnown RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 SEC23AQ15436 765 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 RRP12Q5JTH9 1297 aaKnown RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 CTR9Q6PD62 1173 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 UBAC1Q9BSL1 405 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 ALG1Q9BT22 464 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 NUP62CLQ9H1M0 184 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 TOMM22Q9NS69 142 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 FMNL1O95466 1100 aaPredicted RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 LDHBP07195 334 aaKnown RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 LDHCP07864 332 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 SLC3A2P08195 630 aaKnown RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 LIG1P18858 919 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 PPP4CP60510 307 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 RBM43Q6ZSC3 357 aaKnown RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 RAB11FIP4Q86YS3 637 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 PDLIM2Q96JY6 352 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 USP28Q96RU2 1077 aa22.62■■□□□ 1.21
HOXC4-201ENST00000303406 DCP1AQ9NPI6 582 aaPredicted RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 BAZ2AQ9UIF9 1905 aaKnown RBP22.62■■□□□ 1.21
HOXC4-201ENST00000303406 YEATS4O95619 227 aa22.61■■□□□ 1.21
HOXC4-201ENST00000303406 FOSBP53539 338 aa22.61■■□□□ 1.21
HOXC4-201ENST00000303406 GUCY1B3Q02153 619 aa22.61■■□□□ 1.21
HOXC4-201ENST00000303406 KIF23Q02241 960 aaPredicted RBP22.61■■□□□ 1.21
HOXC4-201ENST00000303406 RTN1Q16799 776 aa22.61■■□□□ 1.21
HOXC4-201ENST00000303406 POLR3EQ9NVU0 708 aa22.61■■□□□ 1.21
HOXC4-201ENST00000303406 AATFQ9NY61 560 aaKnown RBP eCLIP22.61■■□□□ 1.21
HOXC4-201ENST00000303406 ANKRD31Q8N7Z5 1873 aa22.6■■□□□ 1.21
HOXC4-201ENST00000303406 UFL1O94874 794 aa22.6■■□□□ 1.21
HOXC4-201ENST00000303406 SSRP1Q08945 709 aaKnown RBP22.6■■□□□ 1.21
HOXC4-201ENST00000303406 CLSTN2Q9H4D0 955 aa22.6■■□□□ 1.21
HOXC4-201ENST00000303406 TNKSO95271 1327 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 MAP3K11Q16584 847 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 MYSM1Q5VVJ2 828 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 SP8Q8IXZ3 490 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 ZNF654Q8IZM8 581 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 BICD2Q8TD16 824 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 ZSCAN10Q96SZ4 725 aaPredicted RBP22.59■■□□□ 1.21
HOXC4-201ENST00000303406 CD209Q9NNX6 404 aa22.59■■□□□ 1.21
HOXC4-201ENST00000303406 USP17L12C9JPN9 530 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 USP17L21D6R901 530 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 RANBP6O60518 1105 aaKnown RBP22.58■■□□□ 1.21
HOXC4-201ENST00000303406 BAG3O95817 575 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 ZNF827Q17R98 1081 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 IQCA1Q86XH1 822 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 KCNG4Q8TDN1 519 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 DACT1Q9NYF0 836 aa22.58■■□□□ 1.21
HOXC4-201ENST00000303406 A0A1W2PQ27 194 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 A0A1W2PQ64 194 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 A0A1W2PQD8 194 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 CCDC192P0DO97 292 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 RXRAP19793 462 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 TRIM29Q14134 588 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 HS1BP3Q53T59 392 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms