RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 ATP5DP30049 168 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 SATB1Q01826 763 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 PDE1CQ14123 709 aaPredicted RBP20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 KIFAP3Q92845 792 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 IFT74Q96LB3 600 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 USP26Q9BXU7 913 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 NCOA1Q15788 1441 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 NPHP3Q7Z494 1330 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 CACNA2D3Q8IZS8 1091 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 SYNRGQ9UMZ2 1314 aa20.52■□□□□ 0.88
PITPNC1-201ENST00000299954 ZNF365Q70YC5 407 aa20.52■□□□□ 0.87
PITPNC1-201ENST00000299954 GBP1P32455 592 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 RFC1P35251 1148 aaPredicted RBP20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 FANCCQ00597 558 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 ZYXQ15942 572 aaKnown RBP20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 PNMA8AQ86V59 439 aaPredicted RBP20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 ARMT1Q9H993 441 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 TTC41PQ6P2S7 1318 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 MCUR1Q96AQ8 359 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 TAB2Q9NYJ8 693 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 GINS2Q9Y248 185 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 TACC3Q9Y6A5 838 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 CEP104O60308 925 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 B4GALNT4Q76KP1 1039 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 CABLES1Q8TDN4 633 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 ASIC3Q9UHC3 531 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 NSD2O96028 1365 aa20.51■□□□□ 0.87
PITPNC1-201ENST00000299954 DYMQ7RTS9 669 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 GABPAQ06546 454 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 CSGALNACT2Q8N6G5 542 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 KIF3CO14782 793 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 NCAPH2Q6IBW4 605 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 ZC3H12CQ9C0D7 883 aaKnown RBP20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 KCNH3Q9ULD8 1083 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 ANKRD36BQ8N2N9 1353 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 SECISBP2LQ93073 1101 aaKnown RBP20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 PTPN23Q9H3S7 1636 aa20.5■□□□□ 0.87
PITPNC1-201ENST00000299954 CASQ2O14958 399 aaPredicted RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 LMNTD2Q8IXW0 634 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 TUBB4BP68371 445 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 VSIG1Q86XK7 387 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 TRIM6Q9C030 488 aaPredicted RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 CPSF2Q9P2I0 782 aaKnown RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 RPS6KB1P23443 525 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 SARNPP82979 210 aaKnown RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 RRAGDQ9NQL2 400 aaPredicted RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 CBX8Q9HC52 389 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 MYO1AQ9UBC5 1043 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 SWAP70Q9UH65 585 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 TTLL3Q9Y4R7 772 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 HHATQ5VTY9 493 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 FAM184BQ9ULE4 1060 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 STK38LQ9Y2H1 464 aa20.49■□□□□ 0.87
PITPNC1-201ENST00000299954 ACTN4O43707 911 aaKnown RBP20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 VCX3BQ9H321 246 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 V9GY48 417 aaPredicted RBP20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 MSH6P52701 1360 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 ANO1Q5XXA6 986 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 CASC4Q6P4E1 433 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 GBP7Q8N8V2 638 aaPredicted RBP20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 STAMQ92783 540 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 NELFCDQ8IXH7 590 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 IFT20Q8IY31 132 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 CTTNBP2NLQ9P2B4 639 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 NESP48681 1621 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 NOX5Q96PH1 765 aa20.48■□□□□ 0.87
PITPNC1-201ENST00000299954 PRDM1O75626 825 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 PTPROQ16827 1216 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 GADD45BO75293 160 aaPredicted RBP20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 MAN1A1P33908 653 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 TRPC3Q13507 836 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 CCDC117Q8IWD4 279 aaPredicted RBP20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 UBL4BQ8N7F7 174 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 TACO1Q9BSH4 297 aaKnown RBP20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 BLZF1Q9H2G9 400 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 SLC27A2O14975 620 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 MYCLP12524 364 aaPredicted RBP20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 MTX1Q13505 466 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 NUF2Q9BZD4 464 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 GOLGA6BA6NDN3 693 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 TIMM10P62072 90 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 NDUFB9Q9Y6M9 179 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 hCG_1642624A0A1W2PR95 340 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 VGLL3A8MV65 326 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 CNNM4Q6P4Q7 775 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 SLF1Q9BQI6 1058 aa20.47■□□□□ 0.87
PITPNC1-201ENST00000299954 CALUO43852 315 aaPredicted RBP20.46■□□□□ 0.87
PITPNC1-201ENST00000299954 OAS2P29728 719 aaKnown RBP20.46■□□□□ 0.87
PITPNC1-201ENST00000299954 TRMT44Q8IYL2 757 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms